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The map label for this gene is 115352288

Identifier: 115352288

GI number: 115352288

Start: 2470803

End: 2471534

Strand: Direct

Name: 115352288

Synonym: Bamb_2237

Alternate gene names: NA

Gene position: 2470803-2471534 (Clockwise)

Preceding gene: 115352287

Following gene: 115352289

Centisome position: 69.47

GC content: 68.99

Gene sequence:

>732_bases
ATGCAGGCTTCGCAATCCGCTCCTGCCGGCATCCTGCCGGCTGCTCCACGTATGAATCCCCGGGTCATCACGGTCGCGGT
CGGTGTGCTTGCCGCACACGCGATCATGCTGACGGCCGCGTGGCTCCATCGCAACGCGCCGCCGCCGAAATCGGTCGAAG
TCCAGTCGATCACCGCGCAGCTCATCACGCCTGCGCCGATCGCCCAGCAGGTCGCGGCCGAATCGATCCCGCAACCCGCG
CCGCCGAAGCCCACCCCGCGCGTCAAACCGAAGGTCGAGCCGAAGCCGGTGCAGAAGGCGGCGAAGCCCGCGCCTCAGCC
GGTGGCGCAATCGCCTGCTCCGTCGCCGACACCCGCGCCGGCTGCCGATCCGACGCCGGCGCCCGCCGCGCCCGCCGCTG
CTGCGCCGGCCGCAACGCCCAGCCCGGCTCGCGAAACGATGCAGGTCAGCGCGCCCAAGAACGTGCCGACGCTTCAATGC
AACTTCGTGAAACCCGACTACCCGTCGATGTCGCGTCGCCGCGGCGAATCGGGCACCGCCTATGTTCACTTCGTCGTCGG
CGTGACCGGCAAGATCGAAAGCGTCGAGCTGCAGAAGAGCAGCGGTTATCCGCGCCTCGACGATGCCGCACTCGACGCGA
TGCGCTCGACCACCTGCCGTCCGTATATCGAGAACGGCCAGGCGATCCGCGCCGCCCGCACACAGCCCTACAACTTCGGG
CTCACCGACTAA

Upstream 100 bases:

>100_bases
CGGATTTGTGACCACCGTTTGCATCTCGCTGCTGATCTTCCGCAAGTAGTGCCGATTCACCCGCCGCGCCCCGGGTGCGA
CGTCGTTCTTTCAAGCTAAC

Downstream 100 bases:

>100_bases
CCTGCCTCATCCGGAAGATTCAAAGGAAACAAAAATGCAAAGCTACGGTATCGCGCACGTCTGGGCGCAAGGTGATTTCG
TCACGCGCGCCATTGCGATC

Product: TonB family protein

Products: NA

Alternate protein names: NB Protein; NB Domain Protein; NB-Like Protein; NB Like Protein; Periplasmic Protein nB

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MQASQSAPAGILPAAPRMNPRVITVAVGVLAAHAIMLTAAWLHRNAPPPKSVEVQSITAQLITPAPIAQQVAAESIPQPA
PPKPTPRVKPKVEPKPVQKAAKPAPQPVAQSPAPSPTPAPAADPTPAPAAPAAAAPAATPSPARETMQVSAPKNVPTLQC
NFVKPDYPSMSRRRGESGTAYVHFVVGVTGKIESVELQKSSGYPRLDDAALDAMRSTTCRPYIENGQAIRAARTQPYNFG
LTD

Sequences:

>Translated_243_residues
MQASQSAPAGILPAAPRMNPRVITVAVGVLAAHAIMLTAAWLHRNAPPPKSVEVQSITAQLITPAPIAQQVAAESIPQPA
PPKPTPRVKPKVEPKPVQKAAKPAPQPVAQSPAPSPTPAPAADPTPAPAAPAAAAPAATPSPARETMQVSAPKNVPTLQC
NFVKPDYPSMSRRRGESGTAYVHFVVGVTGKIESVELQKSSGYPRLDDAALDAMRSTTCRPYIENGQAIRAARTQPYNFG
LTD
>Mature_243_residues
MQASQSAPAGILPAAPRMNPRVITVAVGVLAAHAIMLTAAWLHRNAPPPKSVEVQSITAQLITPAPIAQQVAAESIPQPA
PPKPTPRVKPKVEPKPVQKAAKPAPQPVAQSPAPSPTPAPAADPTPAPAAPAAAAPAATPSPARETMQVSAPKNVPTLQC
NFVKPDYPSMSRRRGESGTAYVHFVVGVTGKIESVELQKSSGYPRLDDAALDAMRSTTCRPYIENGQAIRAARTQPYNFG
LTD

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25320; Mature: 25320

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASQSAPAGILPAAPRMNPRVITVAVGVLAAHAIMLTAAWLHRNAPPPKSVEVQSITAQ
CCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHH
LITPAPIAQQVAAESIPQPAPPKPTPRVKPKVEPKPVQKAAKPAPQPVAQSPAPSPTPAP
HCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
AADPTPAPAAPAAAAPAATPSPARETMQVSAPKNVPTLQCNFVKPDYPSMSRRRGESGTA
CCCCCCCCCCCCCCCCCCCCCCHHHCEEECCCCCCCEEEEEEECCCCCCHHHHCCCCCCE
YVHFVVGVTGKIESVELQKSSGYPRLDDAALDAMRSTTCRPYIENGQAIRAARTQPYNFG
EEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCC
LTD
CCC
>Mature Secondary Structure
MQASQSAPAGILPAAPRMNPRVITVAVGVLAAHAIMLTAAWLHRNAPPPKSVEVQSITAQ
CCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHH
LITPAPIAQQVAAESIPQPAPPKPTPRVKPKVEPKPVQKAAKPAPQPVAQSPAPSPTPAP
HCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
AADPTPAPAAPAAAAPAATPSPARETMQVSAPKNVPTLQCNFVKPDYPSMSRRRGESGTA
CCCCCCCCCCCCCCCCCCCCCCHHHCEEECCCCCCCEEEEEEECCCCCCHHHHCCCCCCE
YVHFVVGVTGKIESVELQKSSGYPRLDDAALDAMRSTTCRPYIENGQAIRAARTQPYNFG
EEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCC
LTD
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA