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The map label for this gene is exbB [H]

Identifier: 115352289

GI number: 115352289

Start: 2471569

End: 2472300

Strand: Direct

Name: exbB [H]

Synonym: Bamb_2238

Alternate gene names: 115352289

Gene position: 2471569-2472300 (Clockwise)

Preceding gene: 115352288

Following gene: 115352290

Centisome position: 69.49

GC content: 65.98

Gene sequence:

>732_bases
ATGCAAAGCTACGGTATCGCGCACGTCTGGGCGCAAGGTGATTTCGTCACGCGCGCCATTGCGATCACGCTGCTCGTGAT
GTCGGTCCTGTCGTGGATCGTGATCATCGTCAAGGGCTGGAACGTGATTCGCCTGAACCGCCTCACGAAGAACGCGGAAC
AGGCGTTCTGGCATTCGGATGACTTCGACGACGGCATCAAGAAGCTCGGTCTCACCGCATCGACGCCGAGCGACAACCCG
TTCCTCGCGCTCGCGCTGTCGGGCAAGGAAGCCGCCGATCACCACCATCAGACGCAGCCGCACCTGCACGACCGCATGGA
CGTGTCCGACTGGGTCACCCGCTGCCTGAAGGACACGATGGACGAAGGCATCTCGCGCATGCAGGCCGGCCTCGCGATTC
TCGCGTCGATCGGCAGCACGGCGCCGTTCGTCGGCCTGTTCGGCACGGTCTGGGGCATCTACCACGCGCTGCTCGTGATC
GGCGCAACCGGCCAGACGTCGATCGACCAGGTCGCGGGCCCGGTCGGCGAATCGCTGATCATGACGGCCTTCGGCCTGTT
CGTCGCGATTCCCGCCGTGCTCGGCTACAACGCGCTGACCCGCGCGAACAAGGGTGTCGTCAGCAAGCTGCGCCGCTTCG
CACACGGTCTGCACGCCTACTTCGTGACGGGCGCGCGCCTCGCGTCGTCGTCGCCCCGCGACGGCCTGCGTCTTGCGACG
CGCGCCAGCTGA

Upstream 100 bases:

>100_bases
ATCGAGAACGGCCAGGCGATCCGCGCCGCCCGCACACAGCCCTACAACTTCGGGCTCACCGACTAACCTGCCTCATCCGG
AAGATTCAAAGGAAACAAAA

Downstream 100 bases:

>100_bases
GACGAGGTGAACCATGGCAATGAACACCGGCTTCAGCGATGACGACGACGATGGCGTGATGAGCGAGATCAACATGACGC
CGCTCGTCGACGTCATGCTC

Product: MotA/TolQ/ExbB proton channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MQSYGIAHVWAQGDFVTRAIAITLLVMSVLSWIVIIVKGWNVIRLNRLTKNAEQAFWHSDDFDDGIKKLGLTASTPSDNP
FLALALSGKEAADHHHQTQPHLHDRMDVSDWVTRCLKDTMDEGISRMQAGLAILASIGSTAPFVGLFGTVWGIYHALLVI
GATGQTSIDQVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKGVVSKLRRFAHGLHAYFVTGARLASSSPRDGLRLAT
RAS

Sequences:

>Translated_243_residues
MQSYGIAHVWAQGDFVTRAIAITLLVMSVLSWIVIIVKGWNVIRLNRLTKNAEQAFWHSDDFDDGIKKLGLTASTPSDNP
FLALALSGKEAADHHHQTQPHLHDRMDVSDWVTRCLKDTMDEGISRMQAGLAILASIGSTAPFVGLFGTVWGIYHALLVI
GATGQTSIDQVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKGVVSKLRRFAHGLHAYFVTGARLASSSPRDGLRLAT
RAS
>Mature_243_residues
MQSYGIAHVWAQGDFVTRAIAITLLVMSVLSWIVIIVKGWNVIRLNRLTKNAEQAFWHSDDFDDGIKKLGLTASTPSDNP
FLALALSGKEAADHHHQTQPHLHDRMDVSDWVTRCLKDTMDEGISRMQAGLAILASIGSTAPFVGLFGTVWGIYHALLVI
GATGQTSIDQVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKGVVSKLRRFAHGLHAYFVTGARLASSSPRDGLRLAT
RAS

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates. Protects exbD from proteolytic degradation and functionally stabilizes tonB [H]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

Organism=Escherichia coli, GI1786958, Length=222, Percent_Identity=29.2792792792793, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1789381, Length=193, Percent_Identity=28.4974093264249, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 26233; Mature: 26233

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSYGIAHVWAQGDFVTRAIAITLLVMSVLSWIVIIVKGWNVIRLNRLTKNAEQAFWHSD
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCC
DFDDGIKKLGLTASTPSDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVTRCLKDTM
CHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHH
DEGISRMQAGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLI
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHH
MTAFGLFVAIPAVLGYNALTRANKGVVSKLRRFAHGLHAYFVTGARLASSSPRDGLRLAT
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RAS
CCC
>Mature Secondary Structure
MQSYGIAHVWAQGDFVTRAIAITLLVMSVLSWIVIIVKGWNVIRLNRLTKNAEQAFWHSD
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCC
DFDDGIKKLGLTASTPSDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVTRCLKDTM
CHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHH
DEGISRMQAGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLI
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHH
MTAFGLFVAIPAVLGYNALTRANKGVVSKLRRFAHGLHAYFVTGARLASSSPRDGLRLAT
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RAS
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371459 [H]