Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352287

Identifier: 115352287

GI number: 115352287

Start: 2470349

End: 2470585

Strand: Direct

Name: 115352287

Synonym: Bamb_2236

Alternate gene names: NA

Gene position: 2470349-2470585 (Clockwise)

Preceding gene: 115352286

Following gene: 115352288

Centisome position: 69.46

GC content: 65.4

Gene sequence:

>237_bases
ATGATCGTCTGCGTGTGCAAGTCAGTTTCGGATCGCAAGATTCGCGCGTCCCTCGCCGAGGGCGTGGGTTCCTTCGACGA
ACTCCAGTTCGAGCTCGGCGTGGCCACGTGCTGCGGCAAGTGCGAGGAGTCCGTACGCGACCTCATGGCCGAGCAAGGCG
TCTGCGCGAGCCGGTGCGGCGTCGAGCACCACGCTCATCCGATCCCGGTCACGTTCTACGACCGCAAGGCCGCCTGA

Upstream 100 bases:

>100_bases
GAAGGGTCCGATGACCTTAAAAAAAGCCGAACCCAGGCTTGTCAACCTCCGCAAATTTAATGATAATAATTCGCATTACC
GTTAGCTATCGCAACTCATC

Downstream 100 bases:

>100_bases
GCGGCGCCGAGCGTGCGCATGCGGCCGCCGCCGCATTTTATGTCCGACCGTCAGCAAGCCATTTTCCGCGCGAGCCAGCG
GCTTACCTGCCAAGGAGCCT

Product: BFD/(2Fe-2S)-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MIVCVCKSVSDRKIRASLAEGVGSFDELQFELGVATCCGKCEESVRDLMAEQGVCASRCGVEHHAHPIPVTFYDRKAA

Sequences:

>Translated_78_residues
MIVCVCKSVSDRKIRASLAEGVGSFDELQFELGVATCCGKCEESVRDLMAEQGVCASRCGVEHHAHPIPVTFYDRKAA
>Mature_78_residues
MIVCVCKSVSDRKIRASLAEGVGSFDELQFELGVATCCGKCEESVRDLMAEQGVCASRCGVEHHAHPIPVTFYDRKAA

Specific function: Unknown

COG id: COG2906

COG function: function code P; Bacterioferritin-associated ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8447; Mature: 8447

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
11.5 %Cys+Met (Translated Protein)
9.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
11.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVCVCKSVSDRKIRASLAEGVGSFDELQFELGVATCCGKCEESVRDLMAEQGVCASRCG
CEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
VEHHAHPIPVTFYDRKAA
CCCCCCCCCEEECCCCCC
>Mature Secondary Structure
MIVCVCKSVSDRKIRASLAEGVGSFDELQFELGVATCCGKCEESVRDLMAEQGVCASRCG
CEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
VEHHAHPIPVTFYDRKAA
CCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA