| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352193
Identifier: 115352193
GI number: 115352193
Start: 2352399
End: 2352758
Strand: Direct
Name: 115352193
Synonym: Bamb_2142
Alternate gene names: NA
Gene position: 2352399-2352758 (Clockwise)
Preceding gene: 115352192
Following gene: 115352203
Centisome position: 66.14
GC content: 70.56
Gene sequence:
>360_bases ATGAATCGCCCGTTCCGCATCCTCGTCCTGACCAGCGTCGCCGCCGGCACGCTGGCCCTCGCCGGCTGCGCGGTGCAGCC GCCTTCGTCGACGATCCTCAGCCGCCTGCCCGAACCGGGCGCATCGGGCGGCCAGCCGCCCGCGCTGTCGAGTGCGGAAC GCAAACGCTACGACGAAATCGACCGGCAGGTGCTGCGCGAGCAGAACGATGCCATGGCAGCCGAGGCAGCCGCGCGCGCG TGGGCGTATTACTCGCCGCCGCCCGTGACGGTCTACGGCGGCTATTACGGCGGTTACGGCGGTTGGGGAAACCGCTGGGG CACCGGCATCGGCTATGGCTATCCGGGCTGGTGGTGGTGA
Upstream 100 bases:
>100_bases CATAATGAACGCATGAGCGTCGCATGCGCGGCTCGGTCGCCGCAGGCCCGGCCTTCGGTGCAAGCCGCTTTTCGCTGTCG GCGCGCTGCTGGAGAGACAC
Downstream 100 bases:
>100_bases TGCGCGAACGCGCCGATCGACCCGATTGAAAACCGGCAGGAAATAAAAAAGCGCGGCATTTCCCGCGCTTTTTCAATGGT TCGGACTGCCGTGCTCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MNRPFRILVLTSVAAGTLALAGCAVQPPSSTILSRLPEPGASGGQPPALSSAERKRYDEIDRQVLREQNDAMAAEAAARA WAYYSPPPVTVYGGYYGGYGGWGNRWGTGIGYGYPGWWW
Sequences:
>Translated_119_residues MNRPFRILVLTSVAAGTLALAGCAVQPPSSTILSRLPEPGASGGQPPALSSAERKRYDEIDRQVLREQNDAMAAEAAARA WAYYSPPPVTVYGGYYGGYGGWGNRWGTGIGYGYPGWWW >Mature_119_residues MNRPFRILVLTSVAAGTLALAGCAVQPPSSTILSRLPEPGASGGQPPALSSAERKRYDEIDRQVLREQNDAMAAEAAARA WAYYSPPPVTVYGGYYGGYGGWGNRWGTGIGYGYPGWWW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12826; Mature: 12826
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPFRILVLTSVAAGTLALAGCAVQPPSSTILSRLPEPGASGGQPPALSSAERKRYDEI CCCCEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH DRQVLREQNDAMAAEAAARAWAYYSPPPVTVYGGYYGGYGGWGNRWGTGIGYGYPGWWW HHHHHHHCCHHHHHHHHHHHHCEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNRPFRILVLTSVAAGTLALAGCAVQPPSSTILSRLPEPGASGGQPPALSSAERKRYDEI CCCCEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH DRQVLREQNDAMAAEAAARAWAYYSPPPVTVYGGYYGGYGGWGNRWGTGIGYGYPGWWW HHHHHHHCCHHHHHHHHHHHHCEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA