| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352203
Identifier: 115352203
GI number: 115352203
Start: 2363869
End: 2364945
Strand: Direct
Name: 115352203
Synonym: Bamb_2152
Alternate gene names: NA
Gene position: 2363869-2364945 (Clockwise)
Preceding gene: 115352193
Following gene: 115352204
Centisome position: 66.47
GC content: 73.35
Gene sequence:
>1077_bases ATGCGCACCATCATGCACGACCGACGCCTCCATTTCCTCGTTCCGTTCGCGCTGCCGTCCGCAGCCGATGCGGCCTCGTC CCTGCACACGCTGGACAGCCCCGCGCTCGAAAAGTTGCTGGCCCGCGCGAGCCTCGTCGAGCGCGTGGCCGGCGAGGACT TCCAGCGCACGCTGCCGCACGAGCGCTGGCTGGCCCGCCAGTTCGGCGCGAGCCGGGGCAACGCCGCCGACGAGGCGCCG CTCGCGCCCTACATGTTGCTGGCGGACGGCGGCGACCCGGGCACGCAGGCCTGGGCGTGCGTCGAGCCGGTGCACGTCCA GATCGCGCACGATCACCTCGTGCTCGTCGACCCGGCCAGCCTCGCGCTCGACGACGGCGACGCGGCCGCGCTGCTGGCGG TCGCGCGCCCGCTGATCGAGGAGCTCGGCGTGCGGCTGGAAGCGCCGCGGCCGACCCGCTGGTACTTGTCCAGCGAACAG CTCGCCCGCCTCGCCGGCGCCGCGCCGCTGCGCGCGAGCGGCCGCAACATCGAAATCTGGCTGCCGCACGAGGCGCACAC CGGCGAACGTTCGCGGATGTGGATGAAGCTGCAGAACGAAGTGCAGATGGCGTGGTTCCAGCACCCGGTCAACGAAGCGC GCGAAGCGCGCGGGTTGCCCGCCGTCAATTCGATCTGGTTCCACGCGCAAGGCACGCTGAAGCCGGTCGGCAAGCCGTTC GAGCGCGTACTGTCCGCCTCCCCCGCGGCGCTCGGCCTCGCGCGCGCGGCACAGGCCGAGGCCGGTGCCGCGCCGGCCGC CTTCGGTGCGCTGCCCGCCGCCGCCGGCGCGACACTCGTCGAGCTGCCGGCGCTGTCCGCCCCGTTCATCGAACAGGACT GGGCACGCTGGCACGACGCGCTCGCCACGCTCGAGCGCGACTGGTTCGCGCCGACCCTCGCCGCGCTGCGGAACGGCGAG CTGGCCAGCGTCGATTTCACGCTGTGCGGCGACACCAGCTCCGTGACGCTGCACGCGACGCGCGGCGACCTGCGCAAGTT CTGGCGCCGCCGCGCGCTGGCGTCCCTGTTCGAATGA
Upstream 100 bases:
>100_bases CCATCCGGCGGAGGCCGGCCGCCCGGGCGCGGTCGAAAAACGGTCGCCGGACGCAATCGGGCCGTCCGCCGGCCCGATCA CGCGCGCAGTTTGCCATACA
Downstream 100 bases:
>100_bases CCCCACTCGTATGACCCGGATCGTTACCCGCCCCGTCGCGCCCGCCGACGCAGAAGCGCTCGCGCGCCACGGCCTGCACC CTGTCCTCGCGCGGCTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: 2 3-Bisphosphoglycerate-Independent Phosphoglycerate Mutase; Regulatory Protein
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MRTIMHDRRLHFLVPFALPSAADAASSLHTLDSPALEKLLARASLVERVAGEDFQRTLPHERWLARQFGASRGNAADEAP LAPYMLLADGGDPGTQAWACVEPVHVQIAHDHLVLVDPASLALDDGDAAALLAVARPLIEELGVRLEAPRPTRWYLSSEQ LARLAGAAPLRASGRNIEIWLPHEAHTGERSRMWMKLQNEVQMAWFQHPVNEAREARGLPAVNSIWFHAQGTLKPVGKPF ERVLSASPAALGLARAAQAEAGAAPAAFGALPAAAGATLVELPALSAPFIEQDWARWHDALATLERDWFAPTLAALRNGE LASVDFTLCGDTSSVTLHATRGDLRKFWRRRALASLFE
Sequences:
>Translated_358_residues MRTIMHDRRLHFLVPFALPSAADAASSLHTLDSPALEKLLARASLVERVAGEDFQRTLPHERWLARQFGASRGNAADEAP LAPYMLLADGGDPGTQAWACVEPVHVQIAHDHLVLVDPASLALDDGDAAALLAVARPLIEELGVRLEAPRPTRWYLSSEQ LARLAGAAPLRASGRNIEIWLPHEAHTGERSRMWMKLQNEVQMAWFQHPVNEAREARGLPAVNSIWFHAQGTLKPVGKPF ERVLSASPAALGLARAAQAEAGAAPAAFGALPAAAGATLVELPALSAPFIEQDWARWHDALATLERDWFAPTLAALRNGE LASVDFTLCGDTSSVTLHATRGDLRKFWRRRALASLFE >Mature_358_residues MRTIMHDRRLHFLVPFALPSAADAASSLHTLDSPALEKLLARASLVERVAGEDFQRTLPHERWLARQFGASRGNAADEAP LAPYMLLADGGDPGTQAWACVEPVHVQIAHDHLVLVDPASLALDDGDAAALLAVARPLIEELGVRLEAPRPTRWYLSSEQ LARLAGAAPLRASGRNIEIWLPHEAHTGERSRMWMKLQNEVQMAWFQHPVNEAREARGLPAVNSIWFHAQGTLKPVGKPF ERVLSASPAALGLARAAQAEAGAAPAAFGALPAAAGATLVELPALSAPFIEQDWARWHDALATLERDWFAPTLAALRNGE LASVDFTLCGDTSSVTLHATRGDLRKFWRRRALASLFE
Specific function: Unknown
COG id: COG4255
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38914; Mature: 38914
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTIMHDRRLHFLVPFALPSAADAASSLHTLDSPALEKLLARASLVERVAGEDFQRTLPH CCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHCCH ERWLARQFGASRGNAADEAPLAPYMLLADGGDPGTQAWACVEPVHVQIAHDHLVLVDPAS HHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCEEEEEECCCEEEECCHH LALDDGDAAALLAVARPLIEELGVRLEAPRPTRWYLSSEQLARLAGAAPLRASGRNIEIW EEECCCCHHHHHHHHHHHHHHCCCEECCCCCCEEEECHHHHHHHHCCCCCCCCCCEEEEE LPHEAHTGERSRMWMKLQNEVQMAWFQHPVNEAREARGLPAVNSIWFHAQGTLKPVGKPF ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCEEEEECCCCCCCCHHH ERVLSASPAALGLARAAQAEAGAAPAAFGALPAAAGATLVELPALSAPFIEQDWARWHDA HHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCEEECCCCCCCCHHHHHHHHHHH LATLERDWFAPTLAALRNGELASVDFTLCGDTSSVTLHATRGDLRKFWRRRALASLFE HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRTIMHDRRLHFLVPFALPSAADAASSLHTLDSPALEKLLARASLVERVAGEDFQRTLPH CCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHCCH ERWLARQFGASRGNAADEAPLAPYMLLADGGDPGTQAWACVEPVHVQIAHDHLVLVDPAS HHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCEEEEEECCCEEEECCHH LALDDGDAAALLAVARPLIEELGVRLEAPRPTRWYLSSEQLARLAGAAPLRASGRNIEIW EEECCCCHHHHHHHHHHHHHHCCCEECCCCCCEEEECHHHHHHHHCCCCCCCCCCEEEEE LPHEAHTGERSRMWMKLQNEVQMAWFQHPVNEAREARGLPAVNSIWFHAQGTLKPVGKPF ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCEEEEECCCCCCCCHHH ERVLSASPAALGLARAAQAEAGAAPAAFGALPAAAGATLVELPALSAPFIEQDWARWHDA HHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCEEECCCCCCCCHHHHHHHHHHH LATLERDWFAPTLAALRNGELASVDFTLCGDTSSVTLHATRGDLRKFWRRRALASLFE HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA