| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is hslO [H]
Identifier: 115352192
GI number: 115352192
Start: 2351313
End: 2352263
Strand: Direct
Name: hslO [H]
Synonym: Bamb_2141
Alternate gene names: 115352192
Gene position: 2351313-2352263 (Clockwise)
Preceding gene: 115352191
Following gene: 115352193
Centisome position: 66.11
GC content: 66.77
Gene sequence:
>951_bases GTGAGCGACCAGTTACAGAAATTCATGTTCAATTCGGCACCCGTGCGCGGCGAGATCGTGTCGCTGCGCAACACGTGGCA AGAGGTGCTTTCCCGCCGTGACTACCCTGCTCCGGTGCGCACGGTGCTCGGCGAGATGATGGCCGCGTGTGCGCTGCTGT CCGCGAACCTGAAATTTCACGGCACCCTGATCATGCAGATCTTCGGCGACGGCCCGGTCCAGATGCTGGTCGTCCAGTGC AGCTCGGACCTGTCGATGCGCGCCACGGCCAAGTTCGCCGGCGACGCGGCGCAGACGATCGGCGACGACACGAGCTTTGC GTCGCTCGTCAACGCGAGCGGCCACGGCCGCTGCGTGATCACGCTCGACCCGGCCGAGAAGCTGCCGGGCCAGCAGCCGT ACCAGGGCATCGTGCCGCTGAACGGCGTCGACGGTCCGCTCGAATCGGTGTCGCAGGTGCTCGAGCACTACATGCATCAC TCGGAGCAGCTCGACACGCGGCTGTGGCTCGCGGCCGATCGCGACCGCGCGGTCGGCATGCTGCTGCAGAAGCTGCCGGG CGACGGCGGCATCGTGCCGCGCAACGCCGAGACGGACATCGATACCTGGGAGCGGGTGTGCACGCTCGGCGGCACGCTGT CCGCGAAGGAACTGCTCGAGGTCGAACCGGAAGTCGTGTTCCGCCGGCTCTTCTGGCAGGAAAACGTGCAGCACTTCGAA CCGGCCGGTACGCGCTTCCAGTGCTCGTGCTCGCGCGAGAAGGTCGGCGCGATGCTGCGCATGCTCGGTCGCGATGAAGT CGACAGCGTGATCGTCGAGCGCGGTCACGTCGAGATTCACTGCGAGTTCTGCAACCAGCGCTACGAGTTCGACCCCGTCG ATGTCGCGCAGTTGTTCGCCGCGCCGGAACTCGCGACCGGCATCACGCCCGCGGCCGGCCAGCGTCACTGA
Upstream 100 bases:
>100_bases GCGACTGCGCGCCAATGCGAAGACGTACGTCGAGCGACGTGCGCATTTCAAGGAGCAACTCGTGCGGATCGGGTGATTCG CGCGATTTCAAGGAAGAAGA
Downstream 100 bases:
>100_bases GCCGCGCGCCCGTGCCCGCGATGCGGGCGCGGGCGCATAATGAACGCATGAGCGTCGCATGCGCGGCTCGGTCGCCGCAG GCCCGGCCTTCGGTGCAAGC
Product: Hsp33 protein
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSDQLQKFMFNSAPVRGEIVSLRNTWQEVLSRRDYPAPVRTVLGEMMAACALLSANLKFHGTLIMQIFGDGPVQMLVVQC SSDLSMRATAKFAGDAAQTIGDDTSFASLVNASGHGRCVITLDPAEKLPGQQPYQGIVPLNGVDGPLESVSQVLEHYMHH SEQLDTRLWLAADRDRAVGMLLQKLPGDGGIVPRNAETDIDTWERVCTLGGTLSAKELLEVEPEVVFRRLFWQENVQHFE PAGTRFQCSCSREKVGAMLRMLGRDEVDSVIVERGHVEIHCEFCNQRYEFDPVDVAQLFAAPELATGITPAAGQRH
Sequences:
>Translated_316_residues MSDQLQKFMFNSAPVRGEIVSLRNTWQEVLSRRDYPAPVRTVLGEMMAACALLSANLKFHGTLIMQIFGDGPVQMLVVQC SSDLSMRATAKFAGDAAQTIGDDTSFASLVNASGHGRCVITLDPAEKLPGQQPYQGIVPLNGVDGPLESVSQVLEHYMHH SEQLDTRLWLAADRDRAVGMLLQKLPGDGGIVPRNAETDIDTWERVCTLGGTLSAKELLEVEPEVVFRRLFWQENVQHFE PAGTRFQCSCSREKVGAMLRMLGRDEVDSVIVERGHVEIHCEFCNQRYEFDPVDVAQLFAAPELATGITPAAGQRH >Mature_315_residues SDQLQKFMFNSAPVRGEIVSLRNTWQEVLSRRDYPAPVRTVLGEMMAACALLSANLKFHGTLIMQIFGDGPVQMLVVQCS SDLSMRATAKFAGDAAQTIGDDTSFASLVNASGHGRCVITLDPAEKLPGQQPYQGIVPLNGVDGPLESVSQVLEHYMHHS EQLDTRLWLAADRDRAVGMLLQKLPGDGGIVPRNAETDIDTWERVCTLGGTLSAKELLEVEPEVVFRRLFWQENVQHFEP AGTRFQCSCSREKVGAMLRMLGRDEVDSVIVERGHVEIHCEFCNQRYEFDPVDVAQLFAAPELATGITPAAGQRH
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family [H]
Homologues:
Organism=Escherichia coli, GI87082260, Length=318, Percent_Identity=35.8490566037736, Blast_Score=199, Evalue=2e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - InterPro: IPR023212 [H]
Pfam domain/function: PF01430 HSP33 [H]
EC number: NA
Molecular weight: Translated: 34895; Mature: 34764
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQLQKFMFNSAPVRGEIVSLRNTWQEVLSRRDYPAPVRTVLGEMMAACALLSANLKFH CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEC GTLIMQIFGDGPVQMLVVQCSSDLSMRATAKFAGDAAQTIGDDTSFASLVNASGHGRCVI CEEEEEEECCCCEEEEEEECCCCCCHHHHHHHCCHHHHHCCCCHHHHHHHCCCCCCEEEE TLDPAEKLPGQQPYQGIVPLNGVDGPLESVSQVLEHYMHHSEQLDTRLWLAADRDRAVGM EECCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHH LLQKLPGDGGIVPRNAETDIDTWERVCTLGGTLSAKELLEVEPEVVFRRLFWQENVQHFE HHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCC PAGTRFQCSCSREKVGAMLRMLGRDEVDSVIVERGHVEIHCEFCNQRYEFDPVDVAQLFA CCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEHHCCCCCCCCHHHHHHHH APELATGITPAAGQRH CCHHHCCCCCCCCCCC >Mature Secondary Structure SDQLQKFMFNSAPVRGEIVSLRNTWQEVLSRRDYPAPVRTVLGEMMAACALLSANLKFH CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEC GTLIMQIFGDGPVQMLVVQCSSDLSMRATAKFAGDAAQTIGDDTSFASLVNASGHGRCVI CEEEEEEECCCCEEEEEEECCCCCCHHHHHHHCCHHHHHCCCCHHHHHHHCCCCCCEEEE TLDPAEKLPGQQPYQGIVPLNGVDGPLESVSQVLEHYMHHSEQLDTRLWLAADRDRAVGM EECCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHH LLQKLPGDGGIVPRNAETDIDTWERVCTLGGTLSAKELLEVEPEVVFRRLFWQENVQHFE HHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCC PAGTRFQCSCSREKVGAMLRMLGRDEVDSVIVERGHVEIHCEFCNQRYEFDPVDVAQLFA CCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEHHCCCCCCCCHHHHHHHH APELATGITPAAGQRH CCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782 [H]