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The map label for this gene is yrdA [C]

Identifier: 115352191

GI number: 115352191

Start: 2350764

End: 2351288

Strand: Direct

Name: yrdA [C]

Synonym: Bamb_2140

Alternate gene names: 115352191

Gene position: 2350764-2351288 (Clockwise)

Preceding gene: 115352179

Following gene: 115352192

Centisome position: 66.1

GC content: 63.24

Gene sequence:

>525_bases
GTGACGATCTACAAACTGGGCGAGACGGCCCCGACGATCCACGAAAGCGTATTCGTCGCCGATACGGCGGCCATCATCGG
CAAGGTCGTGCTGGAGGAAAACGCGAGCGTCTGGTTCGGCGCGACGATTCGCGGCGACAACGAGACGATCACGGTCGGCA
CCGGAAGCAATGTCCAGGAAGGCGCGGTCCTGCACACCGACCCCGGTTTTCCGCTGACGATTGCGGAAAACGTGACGATC
GGGCACCAGGCGATGCTGCACGGCTGCACGATCGGCGAAGGTTCGCTGATCGGGATTCAGGCGGTGGTCTTGAATGGTGC
GGTCATCGGCCGCAACTGTCTGGTTGGTGCCGGCGCGGTCGTGACGGAAGGCAAGGTGTTCCCGGACAATTCGCTGATTC
TCGGCGCCCCGGCGAAAGTCGTGCGCGAGCTGTCGGCGGACGATATCGCGCGACTGCGCGCCAATGCGAAGACGTACGTC
GAGCGACGTGCGCATTTCAAGGAGCAACTCGTGCGGATCGGGTGA

Upstream 100 bases:

>100_bases
GTTTACAATATGCGTTTGTGCCGCGACGCAATGCAATGCGCCCGGCACGCCAGACGCGCCATTCTACCGGCGCCCATCAT
CGAAGAGACCAGGAGACTCC

Downstream 100 bases:

>100_bases
TTCGCGCGATTTCAAGGAAGAAGAGTGAGCGACCAGTTACAGAAATTCATGTTCAATTCGGCACCCGTGCGCGGCGAGAT
CGTGTCGCTGCGCAACACGT

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTIYKLGETAPTIHESVFVADTAAIIGKVVLEENASVWFGATIRGDNETITVGTGSNVQEGAVLHTDPGFPLTIAENVTI
GHQAMLHGCTIGEGSLIGIQAVVLNGAVIGRNCLVGAGAVVTEGKVFPDNSLILGAPAKVVRELSADDIARLRANAKTYV
ERRAHFKEQLVRIG

Sequences:

>Translated_174_residues
MTIYKLGETAPTIHESVFVADTAAIIGKVVLEENASVWFGATIRGDNETITVGTGSNVQEGAVLHTDPGFPLTIAENVTI
GHQAMLHGCTIGEGSLIGIQAVVLNGAVIGRNCLVGAGAVVTEGKVFPDNSLILGAPAKVVRELSADDIARLRANAKTYV
ERRAHFKEQLVRIG
>Mature_173_residues
TIYKLGETAPTIHESVFVADTAAIIGKVVLEENASVWFGATIRGDNETITVGTGSNVQEGAVLHTDPGFPLTIAENVTIG
HQAMLHGCTIGEGSLIGIQAVVLNGAVIGRNCLVGAGAVVTEGKVFPDNSLILGAPAKVVRELSADDIARLRANAKTYVE
RRAHFKEQLVRIG

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=166, Percent_Identity=37.9518072289157, Blast_Score=131, Evalue=2e-32,
Organism=Escherichia coli, GI1787667, Length=159, Percent_Identity=41.5094339622642, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI87081681, Length=161, Percent_Identity=36.6459627329193, Blast_Score=109, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18242; Mature: 18111

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIYKLGETAPTIHESVFVADTAAIIGKVVLEENASVWFGATIRGDNETITVGTGSNVQE
CEEEECCCCCCCHHHEEEEEHHHHHHHHHEEECCCCEEEEEEEECCCCEEEEECCCCCCC
GAVLHTDPGFPLTIAENVTIGHQAMLHGCTIGEGSLIGIQAVVLNGAVIGRNCLVGAGAV
CEEEEECCCCCEEEECCCEECCHHHEEECCCCCCCEEEEEEEEECCEEECCCEEEECCEE
VTEGKVFPDNSLILGAPAKVVRELSADDIARLRANAKTYVERRAHFKEQLVRIG
EECCEECCCCCEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TIYKLGETAPTIHESVFVADTAAIIGKVVLEENASVWFGATIRGDNETITVGTGSNVQE
EEEECCCCCCCHHHEEEEEHHHHHHHHHEEECCCCEEEEEEEECCCCEEEEECCCCCCC
GAVLHTDPGFPLTIAENVTIGHQAMLHGCTIGEGSLIGIQAVVLNGAVIGRNCLVGAGAV
CEEEEECCCCCEEEECCCEECCHHHEEECCCCCCCEEEEEEEEECCEEECCCEEEECCEE
VTEGKVFPDNSLILGAPAKVVRELSADDIARLRANAKTYVERRAHFKEQLVRIG
EECCEECCCCCEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]