| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352179
Identifier: 115352179
GI number: 115352179
Start: 2340970
End: 2341215
Strand: Direct
Name: 115352179
Synonym: Bamb_2128
Alternate gene names: NA
Gene position: 2340970-2341215 (Clockwise)
Preceding gene: 115352178
Following gene: 115352191
Centisome position: 65.82
GC content: 52.03
Gene sequence:
>246_bases TTGACCCCGCATTTGTCGACGGTCGATAGGAAAGTGCATATAATTTCCGCCCAAGCCGTAGGGAAGATTCACGCTCTAGA AGTGCGTCTCCACCAGCGGCCCAGGTCGGTGTTGGAGCACATTACCGGTATTGTTTCGCGCTGTTGCTTACCTTTAACCA TAAAAGGACGTGATCATGAAGAAATCCCTCCTCGTAGCTTCCCTGTTGGCTGCTGTTGCACTGGCTGCTTGCAACAAGAG CGCTGA
Upstream 100 bases:
>100_bases CGAGTGGTATTGTGCGGGCTGGATACGGGTCGGAAACCGGATTTAGTGAGTTGCCCCGTATGCCCATGCAGATCAAATTC TGTATGGGAAAGACAACGTA
Downstream 100 bases:
>100_bases TCAAGCTGCTTCGTCGGCTGCTAGCGACGCATCGGCTGCTGCTTCGTCGGCTGCTTCGGCAGTTGCTGGTGCTGCGAGCG ACGCTTCGGCTGCTGCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MTPHLSTVDRKVHIISAQAVGKIHALEVRLHQRPRSVLEHITGIVSRCCLPLTIKGRDHEEIPPRSFPVGCCCTGCLQQE R
Sequences:
>Translated_81_residues MTPHLSTVDRKVHIISAQAVGKIHALEVRLHQRPRSVLEHITGIVSRCCLPLTIKGRDHEEIPPRSFPVGCCCTGCLQQE R >Mature_80_residues TPHLSTVDRKVHIISAQAVGKIHALEVRLHQRPRSVLEHITGIVSRCCLPLTIKGRDHEEIPPRSFPVGCCCTGCLQQER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9061; Mature: 8930
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 7.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPHLSTVDRKVHIISAQAVGKIHALEVRLHQRPRSVLEHITGIVSRCCLPLTIKGRDHE CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEECCCCCC EIPPRSFPVGCCCTGCLQQER CCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure TPHLSTVDRKVHIISAQAVGKIHALEVRLHQRPRSVLEHITGIVSRCCLPLTIKGRDHE CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEECCCCCC EIPPRSFPVGCCCTGCLQQER CCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA