The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352052

Identifier: 115352052

GI number: 115352052

Start: 2197662

End: 2197928

Strand: Direct

Name: 115352052

Synonym: Bamb_2001

Alternate gene names: NA

Gene position: 2197662-2197928 (Clockwise)

Preceding gene: 115352051

Following gene: 115352053

Centisome position: 61.79

GC content: 61.05

Gene sequence:

>267_bases
ATGATGAGAAACTCCATTCCGTTCCTGCTGGCCGTGGCATTAACCGCTTGCGGCCAATCGGAAACGCCCAAGCAGGCCGA
GGTGTCGACCGTGGAGGAACTGGCCGCCGATCCGGCACTGCTGAAGGAGCTGCGCCAGCAGTGCAAGACTGATCGCGCCA
GGCTTGGCGACGTGCTGTGCAATCGAGTTGCCGAGGCTACGCGCAAGCGGTTCTACGGCGATGGAAAGACCCCGTATACG
CCGCCGAAGGAACAGCCTAAGTTCTGA

Upstream 100 bases:

>100_bases
AAATGCTCGCCCGCTTCATCGACCGTGTGCAGGCCATCGAATCACCCGAAGGTAGCAGGCCCACGCCGGGTCTTGATGCC
GACTCTCTGGAGGAACCCGC

Downstream 100 bases:

>100_bases
TCGCGGGCGATTCCAAAAAATATTCTGTTTTCTCGCTATACACGCCGCAATGCGCCTTCGCTTGCGGCGTTTTTCTTTGG
CTCGACGCTGCGCGAATTCT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MMRNSIPFLLAVALTACGQSETPKQAEVSTVEELAADPALLKELRQQCKTDRARLGDVLCNRVAEATRKRFYGDGKTPYT
PPKEQPKF

Sequences:

>Translated_88_residues
MMRNSIPFLLAVALTACGQSETPKQAEVSTVEELAADPALLKELRQQCKTDRARLGDVLCNRVAEATRKRFYGDGKTPYT
PPKEQPKF
>Mature_88_residues
MMRNSIPFLLAVALTACGQSETPKQAEVSTVEELAADPALLKELRQQCKTDRARLGDVLCNRVAEATRKRFYGDGKTPYT
PPKEQPKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9796; Mature: 9796

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRNSIPFLLAVALTACGQSETPKQAEVSTVEELAADPALLKELRQQCKTDRARLGDVLC
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
NRVAEATRKRFYGDGKTPYTPPKEQPKF
HHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMRNSIPFLLAVALTACGQSETPKQAEVSTVEELAADPALLKELRQQCKTDRARLGDVLC
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
NRVAEATRKRFYGDGKTPYTPPKEQPKF
HHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA