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The map label for this gene is traG [H]

Identifier: 115352053

GI number: 115352053

Start: 2198164

End: 2200161

Strand: Direct

Name: traG [H]

Synonym: Bamb_2002

Alternate gene names: 115352053

Gene position: 2198164-2200161 (Clockwise)

Preceding gene: 115352052

Following gene: 115352054

Centisome position: 61.81

GC content: 65.22

Gene sequence:

>1998_bases
ATGCAAGCTCAGGGCGTGTTGTTCGGGCAGATCGCGGTTGTTTTCAGCATCGTGATCGCCGGTGTGTGGAGTGCAACGCA
ATGGACAGCCGCCGCTCTGGCCTACCAACTACGCCTTGGCTCGCCCTGGTTCGATTTCTTCGGAATGCCGGTCTATCACC
CCTGGCGGCTGTTCGAGTGGTGGTTCTTCTTCGATGCCTACGCGCCGCACGTCTTCGATATAGGCGGCGCCATTGCGGGC
GGCAGCGGCCTGGTGGCCGTGGTGGTCGCCATCGCCATGTCGGTGTGGCGCTCGCGGCAATCGCGCCTGGTCACGACCTA
TGGCTCAGCACGTTGGGCCAACACCGCCGACATTCGCAAAGCCGGGTTGATGCAGCCTGCCGGCGTCCTTCTCGGCCTCC
ATGACGGACAGTACCTGCGCCATGAAGGCCCGGAACACGTCCTGACCTTCGCGCCCACGCGCTCTGGCAAAGGCGTGGGC
CTGGTGGTGCCGACGCTGCTGTCATGGCCTGCCTCGGCCGTCATCCACGACATCAAGGGCGAGAACTGGCAGATCACCGC
CGGCTGGCGTTCGCGCTTCTCGCATTGCCTGCTGTTCAACCCCACCGATGCGAAGTCAGCCGCGTACAACCCGCTGCTGG
AGGTACGGCGAGGCGCTCATGAAGTGCGCGACGTACAGAACATCGCGGACATCCTTGTCGATCCCGAAGGGGCGCTGGAG
AAGCGCAATCACTGGGAGAAGACCAGCCATGCGCTGCTGGTCGGCGCCATCCTGCATGTGCTCTACGCCGGCGAAGACAA
GACGCTGCGCGGCGTCGCCAACTTCCTCTCCGATCCTGCGTGCCCGTTCGAGCTGACGCTGCATCGGATGATGACGACGA
AGCACCTGGGCGATGCACCGCACACGGTTGTCGCGTCCGCCGCGCGTGAAGTGCTCAACAAGTCGGACAACGAGCGGTCG
GGCGTGCTCTCGACTGCGATGAGCTTCTTGGGCTTGTACCGCGACCCCACGGTGGCCGAGGTCACCTCACGCTGCGACTG
GCGCATCGCCGACCTGATCGCGTCCGAGTCACCCGTGTCGCTGTACCTGGTGGTGCCGCCTTCGGACATCAGCCGCACCA
AGCCGTTGATCCGGCTCATCTTGAACCAGATCGGGCGACGCCTCACCGAATCGCTCGATGGCAGAGACGGCATCGAACGC
CGCCACAAGCTGTTGCTGATGCTCGATGAGTTTCCGGCGCTGGGCCGGCTCGACTTCTTCGAGACGGCGCTTGCCTTCAT
GGCCGGCTACGGCATCCGCAGCTTCCTCATCGCACAGTCGCTCAACCAGATCGACAAAGCCTACGGCCAGAACCATTCGA
TTCTGGACAACTGCCATGTCCGGGTGACGTTCGCCACGAACGATGAACGCACGGCCAAACGCATTTCAGAGACCTTGGGT
ACGGCGACCGAACTGCGCGCGCAGCGCAACTACGCCGGCCACCGGCTCGCGCCGTGGCTCGGGCATCTCATGGTGTCGCG
GCAGGAGACGGCCCGCCCGCTGCTCACCCCTGGCGAAGTGATGCAGCTCCCGCCCGATGAATCCGTGGTGATGGTGTCCA
GCGTGGCGCCGATCAAGGCCAAGAAGCTGCGCTACTACGCCGACACCAATTTCAAACAGCGGGTACTACCACCGCCTGCG
CTTGCGGCCGGGCGGTACGCCGACGTGCCACCGACCCGCGCCGACGACTGGAGCGGCCTGGCGATTCCGGCCGTGCCCGC
CGCATCGGCCACGGCATCCGCCGATGACCTGGGCGGCACCGATGACGGCGGTCCGCGCCGCCAACCCGAACTCTCCGAAT
CCGTCGCTTACGACCCCGAGCTGGATCCGCCCGATGACCTGGCGCTGCTCGATGACGACGACGACTTGCCGCTGCCGCTT
CCCGGCCAGCTTGACCTGGCCATGCAGCGCACGGCGCGGCTGGCCTCCCTCGACCCCAACGACGGAATCGACTTATGA

Upstream 100 bases:

>100_bases
TTGACCGGCACCGACCCTGCACCGATTCTCGCGTCATGCGGCACGTCCTTGTGCCGCGTGTGAACGAGGAATCAGCGCAG
AGGAAATCGGAGGCCAGTCA

Downstream 100 bases:

>100_bases
GCCAATACCGCCTCAACCTGTTCATCCAACACGAGCACGCCAAGCGGCTGGAAGAACTGGCCGCCAAGAAAGGCGTGTCC
AAGTCGTCCATCGTCGCGGC

Product: conjugal transfer coupling protein TraG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 665; Mature: 665

Protein sequence:

>665_residues
MQAQGVLFGQIAVVFSIVIAGVWSATQWTAAALAYQLRLGSPWFDFFGMPVYHPWRLFEWWFFFDAYAPHVFDIGGAIAG
GSGLVAVVVAIAMSVWRSRQSRLVTTYGSARWANTADIRKAGLMQPAGVLLGLHDGQYLRHEGPEHVLTFAPTRSGKGVG
LVVPTLLSWPASAVIHDIKGENWQITAGWRSRFSHCLLFNPTDAKSAAYNPLLEVRRGAHEVRDVQNIADILVDPEGALE
KRNHWEKTSHALLVGAILHVLYAGEDKTLRGVANFLSDPACPFELTLHRMMTTKHLGDAPHTVVASAAREVLNKSDNERS
GVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLIASESPVSLYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGRDGIER
RHKLLLMLDEFPALGRLDFFETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISETLG
TATELRAQRNYAGHRLAPWLGHLMVSRQETARPLLTPGEVMQLPPDESVVMVSSVAPIKAKKLRYYADTNFKQRVLPPPA
LAAGRYADVPPTRADDWSGLAIPAVPAASATASADDLGGTDDGGPRRQPELSESVAYDPELDPPDDLALLDDDDDLPLPL
PGQLDLAMQRTARLASLDPNDGIDL

Sequences:

>Translated_665_residues
MQAQGVLFGQIAVVFSIVIAGVWSATQWTAAALAYQLRLGSPWFDFFGMPVYHPWRLFEWWFFFDAYAPHVFDIGGAIAG
GSGLVAVVVAIAMSVWRSRQSRLVTTYGSARWANTADIRKAGLMQPAGVLLGLHDGQYLRHEGPEHVLTFAPTRSGKGVG
LVVPTLLSWPASAVIHDIKGENWQITAGWRSRFSHCLLFNPTDAKSAAYNPLLEVRRGAHEVRDVQNIADILVDPEGALE
KRNHWEKTSHALLVGAILHVLYAGEDKTLRGVANFLSDPACPFELTLHRMMTTKHLGDAPHTVVASAAREVLNKSDNERS
GVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLIASESPVSLYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGRDGIER
RHKLLLMLDEFPALGRLDFFETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISETLG
TATELRAQRNYAGHRLAPWLGHLMVSRQETARPLLTPGEVMQLPPDESVVMVSSVAPIKAKKLRYYADTNFKQRVLPPPA
LAAGRYADVPPTRADDWSGLAIPAVPAASATASADDLGGTDDGGPRRQPELSESVAYDPELDPPDDLALLDDDDDLPLPL
PGQLDLAMQRTARLASLDPNDGIDL
>Mature_665_residues
MQAQGVLFGQIAVVFSIVIAGVWSATQWTAAALAYQLRLGSPWFDFFGMPVYHPWRLFEWWFFFDAYAPHVFDIGGAIAG
GSGLVAVVVAIAMSVWRSRQSRLVTTYGSARWANTADIRKAGLMQPAGVLLGLHDGQYLRHEGPEHVLTFAPTRSGKGVG
LVVPTLLSWPASAVIHDIKGENWQITAGWRSRFSHCLLFNPTDAKSAAYNPLLEVRRGAHEVRDVQNIADILVDPEGALE
KRNHWEKTSHALLVGAILHVLYAGEDKTLRGVANFLSDPACPFELTLHRMMTTKHLGDAPHTVVASAAREVLNKSDNERS
GVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLIASESPVSLYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGRDGIER
RHKLLLMLDEFPALGRLDFFETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISETLG
TATELRAQRNYAGHRLAPWLGHLMVSRQETARPLLTPGEVMQLPPDESVVMVSSVAPIKAKKLRYYADTNFKQRVLPPPA
LAAGRYADVPPTRADDWSGLAIPAVPAASATASADDLGGTDDGGPRRQPELSESVAYDPELDPPDDLALLDDDDDLPLPL
PGQLDLAMQRTARLASLDPNDGIDL

Specific function: Required for conjugative transfer of plasmid R751. Binds tightly and specifically to the relaxase traI. Can also bind to DNA without sequence specificity. May form a pore-like structure that could serve as a channel for DNA transfer [H]

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the virD4/traG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003688 [H]

Pfam domain/function: PF02534 TraG [H]

EC number: NA

Molecular weight: Translated: 72986; Mature: 72986

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAQGVLFGQIAVVFSIVIAGVWSATQWTAAALAYQLRLGSPWFDFFGMPVYHPWRLFEW
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHH
WFFFDAYAPHVFDIGGAIAGGSGLVAVVVAIAMSVWRSRQSRLVTTYGSARWANTADIRK
HHHHHHCCCHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHH
AGLMQPAGVLLGLHDGQYLRHEGPEHVLTFAPTRSGKGVGLVVPTLLSWPASAVIHDIKG
HCCCCCCCEEEECCCCCHHHCCCCCCEEEEECCCCCCCCEEHHHHHHCCCHHHHHHHCCC
ENWQITAGWRSRFSHCLLFNPTDAKSAAYNPLLEVRRGAHEVRDVQNIADILVDPEGALE
CCEEEEECHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
KRNHWEKTSHALLVGAILHVLYAGEDKTLRGVANFLSDPACPFELTLHRMMTTKHLGDAP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
HTVVASAAREVLNKSDNERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLIASESPVS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHCCCCCCE
LYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGRDGIERRHKLLLMLDEFPALGRLDFF
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEECCCCCCCCHHHH
ETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISETLG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEEEECCCHHHHHHHHHHHC
TATELRAQRNYAGHRLAPWLGHLMVSRQETARPLLTPGEVMQLPPDESVVMVSSVAPIKA
HHHHHHHHHCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCEEECCCCCCEEEEECCCCCHH
KKLRYYADTNFKQRVLPPPALAAGRYADVPPTRADDWSGLAIPAVPAASATASADDLGGT
HHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
DDGGPRRQPELSESVAYDPELDPPDDLALLDDDDDLPLPLPGQLDLAMQRTARLASLDPN
CCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
DGIDL
CCCCC
>Mature Secondary Structure
MQAQGVLFGQIAVVFSIVIAGVWSATQWTAAALAYQLRLGSPWFDFFGMPVYHPWRLFEW
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHH
WFFFDAYAPHVFDIGGAIAGGSGLVAVVVAIAMSVWRSRQSRLVTTYGSARWANTADIRK
HHHHHHCCCHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHH
AGLMQPAGVLLGLHDGQYLRHEGPEHVLTFAPTRSGKGVGLVVPTLLSWPASAVIHDIKG
HCCCCCCCEEEECCCCCHHHCCCCCCEEEEECCCCCCCCEEHHHHHHCCCHHHHHHHCCC
ENWQITAGWRSRFSHCLLFNPTDAKSAAYNPLLEVRRGAHEVRDVQNIADILVDPEGALE
CCEEEEECHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
KRNHWEKTSHALLVGAILHVLYAGEDKTLRGVANFLSDPACPFELTLHRMMTTKHLGDAP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
HTVVASAAREVLNKSDNERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLIASESPVS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHCCCCCCE
LYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGRDGIERRHKLLLMLDEFPALGRLDFF
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEECCCCCCCCHHHH
ETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISETLG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEEEECCCHHHHHHHHHHHC
TATELRAQRNYAGHRLAPWLGHLMVSRQETARPLLTPGEVMQLPPDESVVMVSSVAPIKA
HHHHHHHHHCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCEEECCCCCCEEEEECCCCCHH
KKLRYYADTNFKQRVLPPPALAAGRYADVPPTRADDWSGLAIPAVPAASATASADDLGGT
HHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
DDGGPRRQPELSESVAYDPELDPPDDLALLDDDDDLPLPLPGQLDLAMQRTARLASLDPN
CCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
DGIDL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1665997 [H]