The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352046

Identifier: 115352046

GI number: 115352046

Start: 2190971

End: 2191675

Strand: Direct

Name: 115352046

Synonym: Bamb_1995

Alternate gene names: NA

Gene position: 2190971-2191675 (Clockwise)

Preceding gene: 115352044

Following gene: 115352047

Centisome position: 61.6

GC content: 67.09

Gene sequence:

>705_bases
ATGACCCAACGCATTCTTTTCGTCCTGACCAGCCACGACCGCAAGGGACCGGCCGGCGCCGCCGACGCCGCGCCCAGCGG
TTTCTATCTGTCCGAGGTCACGCATCCGCATCGGGTGTTGGCCGACGCCGGCCATGCGGTCGATTTCGTCAGCCCCAAGG
GCGGCAAGACGCACGTCGATGGACTCGACCTGGACGATCCGATCAATGCCGCGTTCTGGAACAATGCGGCGCTACGCGGT
GCCACCGAGAACGCCTTGGCACCCGCGCAGGTCGATCCCGACGCTTACGCCGCAATCTTCTACGCCGGCGGCCACGCGAC
GATGTGGGACTTCCCCGACAACGCCGAACTGTCGGCCATCGCGGCGCGTATCTACGAACGTGGCGGCGTGGTCGCTGCGG
TCTGCCACGGCCCGGCCGGGCTGGTGAACCTCAAGCTGTCCGATGGTCGTTATCTTGTCGCGGGCAAGGACGTGTCGGCC
TTCACCAACGACGAGGAACGCGCGGTCGGCCTGTACGACACCGTGCCGTTCCTGCTGGCCGATGCCCTGCAGGAACGCGG
TGCGCGGCATGTGCCCGCGCCGAACTTCCAGGCGCAGGTCGTGGTAAGCGACAGACTGGTGACGGGCCAGAACCCCGCTT
CGGCCAAGGGCGTGGCCGAAGCGATGCTGTCGCTGCTGGAAGCGGCATCCGTGGAGCGGGCCTAA

Upstream 100 bases:

>100_bases
GATTCACCAGAATGAGGTTCCTTACTTCGCATGCCGCAACGCGCACGCCTCCGCCGGAGGCGCTCGGCGGTGTGCTCGAC
TCGCTTGCAGGAGCCTTTCG

Downstream 100 bases:

>100_bases
GCCATGAACGAGCGCATGCCTTTCGTCATCTACGTCTTCGCGCTGTGCGCGTTCGCCCTGGGTTTCACCGAGTTCGTGAC
CATCGGCTTGGTGTCCACTA

Product: ThiJ/PfpI domain-containing protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain-Containing Protein; ThiJ/PfpI Domain Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; DJ-1/PfpI Family; NonF-Related Protein; Peptidase; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase-Like Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; C56 Family Peptidase; Intracellular Protease/Amidase-Like; Amidotransferase; PFPI-Like Cystiene Protease; Protease I; Intracellular Protease Amidase; ThiJ/PfpI Protein; Regulatory Protein; DJ-1/PfpI-Family Transcriptional Regulator; NonF Protein; ThiJ Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Transcriptional Regulator Fis Family; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Pfp1 Family Protein; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTQRILFVLTSHDRKGPAGAADAAPSGFYLSEVTHPHRVLADAGHAVDFVSPKGGKTHVDGLDLDDPINAAFWNNAALRG
ATENALAPAQVDPDAYAAIFYAGGHATMWDFPDNAELSAIAARIYERGGVVAAVCHGPAGLVNLKLSDGRYLVAGKDVSA
FTNDEERAVGLYDTVPFLLADALQERGARHVPAPNFQAQVVVSDRLVTGQNPASAKGVAEAMLSLLEAASVERA

Sequences:

>Translated_234_residues
MTQRILFVLTSHDRKGPAGAADAAPSGFYLSEVTHPHRVLADAGHAVDFVSPKGGKTHVDGLDLDDPINAAFWNNAALRG
ATENALAPAQVDPDAYAAIFYAGGHATMWDFPDNAELSAIAARIYERGGVVAAVCHGPAGLVNLKLSDGRYLVAGKDVSA
FTNDEERAVGLYDTVPFLLADALQERGARHVPAPNFQAQVVVSDRLVTGQNPASAKGVAEAMLSLLEAASVERA
>Mature_233_residues
TQRILFVLTSHDRKGPAGAADAAPSGFYLSEVTHPHRVLADAGHAVDFVSPKGGKTHVDGLDLDDPINAAFWNNAALRGA
TENALAPAQVDPDAYAAIFYAGGHATMWDFPDNAELSAIAARIYERGGVVAAVCHGPAGLVNLKLSDGRYLVAGKDVSAF
TNDEERAVGLYDTVPFLLADALQERGARHVPAPNFQAQVVVSDRLVTGQNPASAKGVAEAMLSLLEAASVERA

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320742, Length=242, Percent_Identity=31.8181818181818, Blast_Score=107, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6324967, Length=232, Percent_Identity=31.0344827586207, Blast_Score=87, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6324975, Length=232, Percent_Identity=31.0344827586207, Blast_Score=87, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6323984, Length=232, Percent_Identity=31.0344827586207, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24541; Mature: 24409

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQRILFVLTSHDRKGPAGAADAAPSGFYLSEVTHPHRVLADAGHAVDFVSPKGGKTHVD
CCCEEEEEEECCCCCCCCCCCCCCCCCEEHHHCCCCHHHHHCCCCEEEEECCCCCCEECC
GLDLDDPINAAFWNNAALRGATENALAPAQVDPDAYAAIFYAGGHATMWDFPDNAELSAI
CCCCCCCCCHHHCCCCEECCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCHHHHH
AARIYERGGVVAAVCHGPAGLVNLKLSDGRYLVAGKDVSAFTNDEERAVGLYDTVPFLLA
HHHHHHCCCEEEEEECCCCCEEEEEECCCEEEEECCCCCCCCCCCHHEEEHHHHHHHHHH
DALQERGARHVPAPNFQAQVVVSDRLVTGQNPASAKGVAEAMLSLLEAASVERA
HHHHHCCCCCCCCCCCEEEEEEECEEEECCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TQRILFVLTSHDRKGPAGAADAAPSGFYLSEVTHPHRVLADAGHAVDFVSPKGGKTHVD
CCEEEEEEECCCCCCCCCCCCCCCCCEEHHHCCCCHHHHHCCCCEEEEECCCCCCEECC
GLDLDDPINAAFWNNAALRGATENALAPAQVDPDAYAAIFYAGGHATMWDFPDNAELSAI
CCCCCCCCCHHHCCCCEECCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCHHHHH
AARIYERGGVVAAVCHGPAGLVNLKLSDGRYLVAGKDVSAFTNDEERAVGLYDTVPFLLA
HHHHHHCCCEEEEEECCCCCEEEEEECCCEEEEECCCCCCCCCCCHHEEEHHHHHHHHHH
DALQERGARHVPAPNFQAQVVVSDRLVTGQNPASAKGVAEAMLSLLEAASVERA
HHHHHCCCCCCCCCCCEEEEEEECEEEECCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA