Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352044

Identifier: 115352044

GI number: 115352044

Start: 2189022

End: 2189861

Strand: Direct

Name: 115352044

Synonym: Bamb_1993

Alternate gene names: NA

Gene position: 2189022-2189861 (Clockwise)

Preceding gene: 115352043

Following gene: 115352046

Centisome position: 61.55

GC content: 53.57

Gene sequence:

>840_bases
ATGAACAAAATGAAATTTCCAGGTCAGCGGATCGGCGAGTTTTCGATCACGGCCATCAGTGACGGATACCTTTCCGCAAG
TCTAGATCTTCTCTCCAATATCGATCCTATGGAGGCGTCCAAGTTGCAGCAGGACGCAGGCGTGAGCGACCCATCCTCGA
TTCACATCAACTGTTACCTGGTGCGTGGAAGGGGTCGCACGATCCTCATCGACGCGGGAGCTGGTGGGTTCAAGCAATGG
GGTGGAAAGTTGATGGCGAATCTCGCACTTGCTGGTGTGCAGCCCTCTGACATTGACACCATTCTTCTGACCCATGCACA
TCCCGACCATGTTGGGGGGCTGCTTGACTCGTCAGGGGAAGCTGCCTTTCCCGATGCAGAGTTAGTCGTCCACCAGCGTG
AGGTTTCTTTTTGGAAGGATGATGGCAACCTCAGCCGAGCGAGTGAGCGGGCTCGTGGCAACTTTCTGTTGGCCCGGAAG
GTGTTCGATCAGTATCGGGAGAAGACGCGCACGTTCACTGATAGCGAAGTTCTCCCTGGCATTAGTGCGATGCCCCTTCT
GGGACATACCGCAGGGCATTCCGGTTATCGCATCGAATCCGATGATCGTAGTCTGCTGGTTTGGGGGGATATCGTTCATT
TCCCCCAGATCCAGATTGCTCGTCCCGAGGTATCCATTGCATTCGACCAAGATCCGATTCTCTCCGCCGAAACACGATCA
AAACTGTTGGGTGTTGTTAGCTCGGACAAAATCCTTATTGCTGGCATGCACCTTGGCGAGCTTGGATTCGGGCACATCAA
GCGCAAAGGTACGCTCTACGAGATTTTCTATGAAGCTTAG

Upstream 100 bases:

>100_bases
CATAAAGCGCCATACGGGGCTAACGGCGCGCATCCGTTGCTTCGGCTATCCGGCCCCCGCCATCTATGCGCGGAACTGAT
TACGCGCAAGGAGCGCCGCA

Downstream 100 bases:

>100_bases
CGGCCGGTAGAGATGTCTGGGATCAGCCAGCAGCGGGGAATGAGATTAATGATCCCATGGTGCTTGCTGCCAGCGATCAA
ACAAAAAATCACTGAACGCC

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like; Twin-Arginine Translocation Pathway Signal; Beta-Lactamase-Like Protein; Beta-Lactamase; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase; Metal Dependent Hydrolase; Hydrolase; Methyl Parathion Hydrolase; Beta-Lactamase Superfamily Hydrolase; Metallo-Hydrolase Protein; Metallo-Beta-Lactamase Superfamily; Metal-Dependent Hydrolase; Beta-Lactamase Family Protein; Glyoxalase II; Zn-Dependent Beta-Lactamase Domain Hydrolase; Beta-Lactamase/Hydrolase; Metallo-Beta-Lactamase Protein; Organophosphate Pesticide Hydrolase; Signal Peptide; Beta-Lactamase-Like Zn-Dependent Hydrolase Protein; Metallo-Beta-Lactamase Domain-Containing Protein; GloB Protein; Aldehyde Dehydrogenase; Metallo-Beta-Lactamase Family Methyl Parathion Hydrolase; Signal Peptide Protein; Metall Dependent Hydrolase; Zn-Dependent Hydrolase Including Glyoxylase

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MNKMKFPGQRIGEFSITAISDGYLSASLDLLSNIDPMEASKLQQDAGVSDPSSIHINCYLVRGRGRTILIDAGAGGFKQW
GGKLMANLALAGVQPSDIDTILLTHAHPDHVGGLLDSSGEAAFPDAELVVHQREVSFWKDDGNLSRASERARGNFLLARK
VFDQYREKTRTFTDSEVLPGISAMPLLGHTAGHSGYRIESDDRSLLVWGDIVHFPQIQIARPEVSIAFDQDPILSAETRS
KLLGVVSSDKILIAGMHLGELGFGHIKRKGTLYEIFYEA

Sequences:

>Translated_279_residues
MNKMKFPGQRIGEFSITAISDGYLSASLDLLSNIDPMEASKLQQDAGVSDPSSIHINCYLVRGRGRTILIDAGAGGFKQW
GGKLMANLALAGVQPSDIDTILLTHAHPDHVGGLLDSSGEAAFPDAELVVHQREVSFWKDDGNLSRASERARGNFLLARK
VFDQYREKTRTFTDSEVLPGISAMPLLGHTAGHSGYRIESDDRSLLVWGDIVHFPQIQIARPEVSIAFDQDPILSAETRS
KLLGVVSSDKILIAGMHLGELGFGHIKRKGTLYEIFYEA
>Mature_279_residues
MNKMKFPGQRIGEFSITAISDGYLSASLDLLSNIDPMEASKLQQDAGVSDPSSIHINCYLVRGRGRTILIDAGAGGFKQW
GGKLMANLALAGVQPSDIDTILLTHAHPDHVGGLLDSSGEAAFPDAELVVHQREVSFWKDDGNLSRASERARGNFLLARK
VFDQYREKTRTFTDSEVLPGISAMPLLGHTAGHSGYRIESDDRSLLVWGDIVHFPQIQIARPEVSIAFDQDPILSAETRS
KLLGVVSSDKILIAGMHLGELGFGHIKRKGTLYEIFYEA

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30459; Mature: 30459

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKMKFPGQRIGEFSITAISDGYLSASLDLLSNIDPMEASKLQQDAGVSDPSSIHINCYL
CCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEEE
VRGRGRTILIDAGAGGFKQWGGKLMANLALAGVQPSDIDTILLTHAHPDHVGGLLDSSGE
EECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHCCCCCCCCC
AAFPDAELVVHQREVSFWKDDGNLSRASERARGNFLLARKVFDQYREKTRTFTDSEVLPG
CCCCCHHEEEEEECCEEEECCCCHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCHHHCCC
ISAMPLLGHTAGHSGYRIESDDRSLLVWGDIVHFPQIQIARPEVSIAFDQDPILSAETRS
CCCCCCCCCCCCCCCCEEECCCCEEEEEECEEECCCEEEECCCEEEEECCCCCCCHHHHH
KLLGVVSSDKILIAGMHLGELGFGHIKRKGTLYEIFYEA
HHEEEECCCCEEEEEEEECCCCCCCEECCCCEEEEEEEC
>Mature Secondary Structure
MNKMKFPGQRIGEFSITAISDGYLSASLDLLSNIDPMEASKLQQDAGVSDPSSIHINCYL
CCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEEE
VRGRGRTILIDAGAGGFKQWGGKLMANLALAGVQPSDIDTILLTHAHPDHVGGLLDSSGE
EECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHCCCCCCCCC
AAFPDAELVVHQREVSFWKDDGNLSRASERARGNFLLARKVFDQYREKTRTFTDSEVLPG
CCCCCHHEEEEEECCEEEECCCCHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCHHHCCC
ISAMPLLGHTAGHSGYRIESDDRSLLVWGDIVHFPQIQIARPEVSIAFDQDPILSAETRS
CCCCCCCCCCCCCCCCEEECCCCEEEEEECEEECCCEEEECCCEEEEECCCCCCCHHHHH
KLLGVVSSDKILIAGMHLGELGFGHIKRKGTLYEIFYEA
HHEEEECCCCEEEEEEEECCCCCCCEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA