Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352014

Identifier: 115352014

GI number: 115352014

Start: 2160090

End: 2160410

Strand: Direct

Name: 115352014

Synonym: Bamb_1963

Alternate gene names: NA

Gene position: 2160090-2160410 (Clockwise)

Preceding gene: 115352013

Following gene: 115352015

Centisome position: 60.74

GC content: 68.85

Gene sequence:

>321_bases
ATGATGCCGCCGACCGAGATCCGCATCGATCATGCGGCGCGTGCGTTGGTGCTGCGCTGGCCGGACGGCGACACGCAACG
CATCGGCTATGCGCGGTTGCGCAGCGATTGCCCGTGCGCCGCATGCCGGAAGATCCGTCTCGGTGGCGGCCGGGTTGATG
CGCAACCCGGCCTGACGCTGGACGGCGTGGAAGCGGCCGGCTACGGCATCCGCCTGCTGTTCGGCGACGGTCATGCGCGC
GGCATCTATCCGTGGCCGTATCTGGCGGAACTCGGCAAAGACCCGGCGGATGCGACCGCCTGCTTGTCGAAGCAGCCCTG
A

Upstream 100 bases:

>100_bases
CGGCGACGCTGCCCGCGCTGCGCGGCGCCCTTGACGATCGCGATCCCGAGGTGCGCAAAGCCGTGCGGATCGCGATCGCG
CAGGTCGGAGATGCCGCACG

Downstream 100 bases:

>100_bases
GATGCCAGCACGGCCCGCACGGCACAAAAAAACGCCCGGCAGGTTCCCCTGCCGGGCGTTCGCATCATCCGATGCCGTGA
TTGGCTACCGAGGCACGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MMPPTEIRIDHAARALVLRWPDGDTQRIGYARLRSDCPCAACRKIRLGGGRVDAQPGLTLDGVEAAGYGIRLLFGDGHAR
GIYPWPYLAELGKDPADATACLSKQP

Sequences:

>Translated_106_residues
MMPPTEIRIDHAARALVLRWPDGDTQRIGYARLRSDCPCAACRKIRLGGGRVDAQPGLTLDGVEAAGYGIRLLFGDGHAR
GIYPWPYLAELGKDPADATACLSKQP
>Mature_106_residues
MMPPTEIRIDHAARALVLRWPDGDTQRIGYARLRSDCPCAACRKIRLGGGRVDAQPGLTLDGVEAAGYGIRLLFGDGHAR
GIYPWPYLAELGKDPADATACLSKQP

Specific function: Unknown

COG id: COG3536

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11460; Mature: 11460

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPPTEIRIDHAARALVLRWPDGDTQRIGYARLRSDCPCAACRKIRLGGGRVDAQPGLTL
CCCCCCEEECCCCEEEEEECCCCCCCCCCHHHHCCCCCHHHHEEEECCCCEECCCCCCEE
DGVEAAGYGIRLLFGDGHARGIYPWPYLAELGKDPADATACLSKQP
CCCCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCHHHHCCCCC
>Mature Secondary Structure
MMPPTEIRIDHAARALVLRWPDGDTQRIGYARLRSDCPCAACRKIRLGGGRVDAQPGLTL
CCCCCCEEECCCCEEEEEECCCCCCCCCCHHHHCCCCCHHHHEEEECCCCEECCCCCCEE
DGVEAAGYGIRLLFGDGHARGIYPWPYLAELGKDPADATACLSKQP
CCCCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA