Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352015

Identifier: 115352015

GI number: 115352015

Start: 2160828

End: 2161415

Strand: Direct

Name: 115352015

Synonym: Bamb_1964

Alternate gene names: NA

Gene position: 2160828-2161415 (Clockwise)

Preceding gene: 115352014

Following gene: 115352024

Centisome position: 60.76

GC content: 60.37

Gene sequence:

>588_bases
ATGACAGATTTAACCGCCAACGCGATTGCCTGCCTCGGATGGGGTTCCCTCGTCTGGGATCCCCGCGACTTACCCTGCCG
TGGAAGCTGGCACAACGACGGGCCCTCACTGCCGGTCGAGTTTGCGCGCGAGTCAGGCGCGAAGAAGAATCAGCGAGGCG
ACAAGATTACGCTGGTCGTCTGTCCCGAGAGCGCGCGTGTTAGGACCTACTGGATCTTGCTTGATGTACCTGACCTCACA
GCCGCACGAAGGTGCCTGGCCGCACGCGAAGGCATTCCTAAGAACTGGGAAACCGATATCGGCTTTGCCGATTGTGCCAG
TGGCCACGCGCATGGACTGGAAGCCGACACGATCACAACCTGGGGATCGGCCATCGGTCTAGCCGGCGTCGTCTGGACAA
ACCTACCCTGCAAGTTCAATGGTCAGCAGGTGATGCCCAGCGAAGCCGAAGTCATAGCGTTCCTACGGGCTCTGGATGGC
ACCAATCGCGCACCTGCAGAGCGATATGTCCGCCAAGCCCCGACCCAGATAGACACGCTCTACAGGCAAGCGATCGAACG
GGAACTCGGGTGGCTCCCTCACGGCTAA

Upstream 100 bases:

>100_bases
AGGCATCATGTCGGGATCGGTGCCACGGCTCCGTCCAGCCTGCATCGACGGCGGGCGACACTGGGCCACTGAAGCTTCGC
GATAAGACAGAGATCAAAGC

Downstream 100 bases:

>100_bases
GCTGACCAACAGGCGCATCCGTCAACGGCATGCCCGCTCCCTCCCCCGCCACTGCTACGTACGGTGCTCAGGCGAGTTCG
GTGAGATAGGCAGATTCACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTDLTANAIACLGWGSLVWDPRDLPCRGSWHNDGPSLPVEFARESGAKKNQRGDKITLVVCPESARVRTYWILLDVPDLT
AARRCLAAREGIPKNWETDIGFADCASGHAHGLEADTITTWGSAIGLAGVVWTNLPCKFNGQQVMPSEAEVIAFLRALDG
TNRAPAERYVRQAPTQIDTLYRQAIERELGWLPHG

Sequences:

>Translated_195_residues
MTDLTANAIACLGWGSLVWDPRDLPCRGSWHNDGPSLPVEFARESGAKKNQRGDKITLVVCPESARVRTYWILLDVPDLT
AARRCLAAREGIPKNWETDIGFADCASGHAHGLEADTITTWGSAIGLAGVVWTNLPCKFNGQQVMPSEAEVIAFLRALDG
TNRAPAERYVRQAPTQIDTLYRQAIERELGWLPHG
>Mature_194_residues
TDLTANAIACLGWGSLVWDPRDLPCRGSWHNDGPSLPVEFARESGAKKNQRGDKITLVVCPESARVRTYWILLDVPDLTA
ARRCLAAREGIPKNWETDIGFADCASGHAHGLEADTITTWGSAIGLAGVVWTNLPCKFNGQQVMPSEAEVIAFLRALDGT
NRAPAERYVRQAPTQIDTLYRQAIERELGWLPHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21408; Mature: 21277

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLTANAIACLGWGSLVWDPRDLPCRGSWHNDGPSLPVEFARESGAKKNQRGDKITLVV
CCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEE
CPESARVRTYWILLDVPDLTAARRCLAAREGIPKNWETDIGFADCASGHAHGLEADTITT
CCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHH
WGSAIGLAGVVWTNLPCKFNGQQVMPSEAEVIAFLRALDGTNRAPAERYVRQAPTQIDTL
HHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHH
YRQAIERELGWLPHG
HHHHHHHHHCCCCCC
>Mature Secondary Structure 
TDLTANAIACLGWGSLVWDPRDLPCRGSWHNDGPSLPVEFARESGAKKNQRGDKITLVV
CCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEE
CPESARVRTYWILLDVPDLTAARRCLAAREGIPKNWETDIGFADCASGHAHGLEADTITT
CCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHH
WGSAIGLAGVVWTNLPCKFNGQQVMPSEAEVIAFLRALDGTNRAPAERYVRQAPTQIDTL
HHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHH
YRQAIERELGWLPHG
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA