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The map label for this gene is 115352013

Identifier: 115352013

GI number: 115352013

Start: 2159098

End: 2160093

Strand: Direct

Name: 115352013

Synonym: Bamb_1962

Alternate gene names: NA

Gene position: 2159098-2160093 (Clockwise)

Preceding gene: 115352012

Following gene: 115352014

Centisome position: 60.71

GC content: 72.19

Gene sequence:

>996_bases
ATGACCGCTTCTTCCCCTGCTTTCCCGCTGCCCGGCGCGCACGATTCCGACCATGCCGCGCTCGTCTCACGCGTTGCCGC
AGCCGACGCATCGGTGCGCCGCATTGCGCTGCTCGAACTCGCCGATCTCGAGGATCCCGAGCTTTTGCCGACCTTCGTTG
CCGCGCTGCGCGACGATCCGTCCGCGGACGTGCGCGGCGAAGCCGCATGTGTGCTTGCCGCGTGGGAACAACCCGATGTC
GTCGACGCACTGTGCCGTGCGCTGCTCGACCCCGACGACGGCGTGCGCGCGATCGCCGCGCAAGGCCTGTCCGAACTGAA
GGACGTCGCATCCGGCGCCGTGCTGTGCCGCTGGGCCGAACACGCCGAAGCGTTCGTGCGCGTCGCCGTGCTGCGCGGGC
TGCGCGAACTGCGCGATCCCGACGCATTCGTGCCGGCGCTGCGCGCGCTCGACGCGCCGGTGTCGGCCGTGCGCGCCGAG
GCCGTCGCCGTGCTCGGCTGGCTCAAGGACGCGCGCGCACTGCCGCCGCTCGCGCGCATCGCAACGACCGACACGCATGC
GGACGTGCGGCGCATCGCGATCGGAGCGGTCGGATTCGCGGCGCCCGACGACGCGGTCGTCGTCACCGCGTTGCTGGCGG
CGCTGCGCGACGCCGCGTGGCAGGTACGCGAGGAAGCCGCCGCGACGCTCGGCAAGCTGCGTGTCGCGGCCGTACGCGCA
CCGCTCGTCGCCGCGCTCGACGACGATTACTGGCAGGTGCGCTTGCGTGCGGTGCGCGCACTGGGGCAATTGCGCGACGC
GGCTGCGGCGCCGGCCATCGTCGGATTGCTGTCGCATGCGATCAGCAACCTGCGCAAGGAGGCGGCACTCGCGCTTGGCG
AACTGCGCGATCCGGCGACGCTGCCCGCGCTGCGCGGCGCCCTTGACGATCGCGATCCCGAGGTGCGCAAAGCCGTGCGG
ATCGCGATCGCGCAGGTCGGAGATGCCGCACGATGA

Upstream 100 bases:

>100_bases
CACATGAAACCTGAAACCTGCGCTGCGCGTGCGTCGACATCAAGCGCCGCTGCCTGGCACTGCTTGACCTCACGCGCCTG
ACCGCTACGAGTTTTCGACC

Downstream 100 bases:

>100_bases
TGCCGCCGACCGAGATCCGCATCGATCATGCGGCGCGTGCGTTGGTGCTGCGCTGGCCGGACGGCGACACGCAACGCATC
GGCTATGCGCGGTTGCGCAG

Product: HEAT repeat-containing PBS lyase

Products: NA

Alternate protein names: HEAT Repeat-Containing Protein; Phycobiliprotein; PBS Lyase HEAT-Like Repeat Domain Protein; PBS Lyase HEAT Domain Protein Repeat-Containing Protein; PBS Lyase HEAT-Like Repeat; HEAT Repeat; HEAT Repeat Protein; Signal Transduction Protein; HEAT Domain Containing Protein

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MTASSPAFPLPGAHDSDHAALVSRVAAADASVRRIALLELADLEDPELLPTFVAALRDDPSADVRGEAACVLAAWEQPDV
VDALCRALLDPDDGVRAIAAQGLSELKDVASGAVLCRWAEHAEAFVRVAVLRGLRELRDPDAFVPALRALDAPVSAVRAE
AVAVLGWLKDARALPPLARIATTDTHADVRRIAIGAVGFAAPDDAVVVTALLAALRDAAWQVREEAAATLGKLRVAAVRA
PLVAALDDDYWQVRLRAVRALGQLRDAAAAPAIVGLLSHAISNLRKEAALALGELRDPATLPALRGALDDRDPEVRKAVR
IAIAQVGDAAR

Sequences:

>Translated_331_residues
MTASSPAFPLPGAHDSDHAALVSRVAAADASVRRIALLELADLEDPELLPTFVAALRDDPSADVRGEAACVLAAWEQPDV
VDALCRALLDPDDGVRAIAAQGLSELKDVASGAVLCRWAEHAEAFVRVAVLRGLRELRDPDAFVPALRALDAPVSAVRAE
AVAVLGWLKDARALPPLARIATTDTHADVRRIAIGAVGFAAPDDAVVVTALLAALRDAAWQVREEAAATLGKLRVAAVRA
PLVAALDDDYWQVRLRAVRALGQLRDAAAAPAIVGLLSHAISNLRKEAALALGELRDPATLPALRGALDDRDPEVRKAVR
IAIAQVGDAAR
>Mature_330_residues
TASSPAFPLPGAHDSDHAALVSRVAAADASVRRIALLELADLEDPELLPTFVAALRDDPSADVRGEAACVLAAWEQPDVV
DALCRALLDPDDGVRAIAAQGLSELKDVASGAVLCRWAEHAEAFVRVAVLRGLRELRDPDAFVPALRALDAPVSAVRAEA
VAVLGWLKDARALPPLARIATTDTHADVRRIAIGAVGFAAPDDAVVVTALLAALRDAAWQVREEAAATLGKLRVAAVRAP
LVAALDDDYWQVRLRAVRALGQLRDAAAAPAIVGLLSHAISNLRKEAALALGELRDPATLPALRGALDDRDPEVRKAVRI
AIAQVGDAAR

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34723; Mature: 34592

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS50077 HEAT_REPEAT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASSPAFPLPGAHDSDHAALVSRVAAADASVRRIALLELADLEDPELLPTFVAALRDDP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
SADVRGEAACVLAAWEQPDVVDALCRALLDPDDGVRAIAAQGLSELKDVASGAVLCRWAE
CCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
HAEAFVRVAVLRGLRELRDPDAFVPALRALDAPVSAVRAEAVAVLGWLKDARALPPLARI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ATTDTHADVRRIAIGAVGFAAPDDAVVVTALLAALRDAAWQVREEAAATLGKLRVAAVRA
HCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLVAALDDDYWQVRLRAVRALGQLRDAAAAPAIVGLLSHAISNLRKEAALALGELRDPAT
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LPALRGALDDRDPEVRKAVRIAIAQVGDAAR
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TASSPAFPLPGAHDSDHAALVSRVAAADASVRRIALLELADLEDPELLPTFVAALRDDP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
SADVRGEAACVLAAWEQPDVVDALCRALLDPDDGVRAIAAQGLSELKDVASGAVLCRWAE
CCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
HAEAFVRVAVLRGLRELRDPDAFVPALRALDAPVSAVRAEAVAVLGWLKDARALPPLARI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ATTDTHADVRRIAIGAVGFAAPDDAVVVTALLAALRDAAWQVREEAAATLGKLRVAAVRA
HCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLVAALDDDYWQVRLRAVRALGQLRDAAAAPAIVGLLSHAISNLRKEAALALGELRDPAT
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LPALRGALDDRDPEVRKAVRIAIAQVGDAAR
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA