Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351900

Identifier: 115351900

GI number: 115351900

Start: 2032915

End: 2033649

Strand: Direct

Name: 115351900

Synonym: Bamb_1849

Alternate gene names: NA

Gene position: 2032915-2033649 (Clockwise)

Preceding gene: 115351899

Following gene: 115351902

Centisome position: 57.16

GC content: 55.78

Gene sequence:

>735_bases
ATGGAAATAGTTGCGCAATTTCGTAGCCCTGCCGATTTCGCTCCGCTTGGCGATTTTGCTGCTCATCTGGTCCGTCTATG
GCCGGTGGTTGAGGCCATGTCACGCGAGGACGAGCGTCTAGGCCAGTGGTGGCTGAAGGCGGATACAGAGGAAGAAGCCC
GTCTGTATCCCATGTATGAAGCGCCCGGCATACCTTCGACAGCCGTTTTGGCAGTGTTGGCGCAACGGTACGCAAAAAAG
ATGGACCTTCCTAAAGTATTTGGCTTCTGGAATGGTCAAATGGACGCGGCCAACAGCGCGAGGCTGAAGTTGGCCATCGA
TGCGAAGAGACGGCCCAGCGAGGTAGAAATTGGGCTACCTGCACAGAGCGCAGTCTCGACGGACGAGCGCAGCTATGAGG
GCATGGCTAAGATAGTGTCCGCGATGGTCACGGTTTATGACCCGATGTATGTCTCTGTTTCACCACGAGAATATTTTCCG
CGGCAGGTGTTTGATGACAAGCCGGGCGTTGGCTGGATGCTATATCTCCCGAAGCCGCTCACGGCTCAGCAAGTTCCGGA
AGCACGCGAATTGATTCCAGTTCCCGAAGCCGGTCGGAAGCAGACCGGGACGATCATTGTGAGCGTCCCAGATGCCGTTT
TTTCAGTGGACAACCCAGAACACGTCGAGATTGCCAACCGTATCGAGATTCGACTCGTCGACCAGGACCTTCTGCCCGCG
TTCGCTGACCTGTAA

Upstream 100 bases:

>100_bases
CGAGGTTGAAATGGTATTTTCAGACGGAGCGGACTTGGAAGTACATGAGAACGCCGCTTGCCCGTCTTAGCGTTGAATCA
GAATGGGTGCCCTGACAAAC

Downstream 100 bases:

>100_bases
GCACGATGCCGGCGCGATAATCCGCGCCGGCATTCTCAGTTAGAATAGCCCCACAGGCTGCGCAGCGTCGTCCCAGCTAT
AAATAATCAGCTCGTTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MEIVAQFRSPADFAPLGDFAAHLVRLWPVVEAMSREDERLGQWWLKADTEEEARLYPMYEAPGIPSTAVLAVLAQRYAKK
MDLPKVFGFWNGQMDAANSARLKLAIDAKRRPSEVEIGLPAQSAVSTDERSYEGMAKIVSAMVTVYDPMYVSVSPREYFP
RQVFDDKPGVGWMLYLPKPLTAQQVPEARELIPVPEAGRKQTGTIIVSVPDAVFSVDNPEHVEIANRIEIRLVDQDLLPA
FADL

Sequences:

>Translated_244_residues
MEIVAQFRSPADFAPLGDFAAHLVRLWPVVEAMSREDERLGQWWLKADTEEEARLYPMYEAPGIPSTAVLAVLAQRYAKK
MDLPKVFGFWNGQMDAANSARLKLAIDAKRRPSEVEIGLPAQSAVSTDERSYEGMAKIVSAMVTVYDPMYVSVSPREYFP
RQVFDDKPGVGWMLYLPKPLTAQQVPEARELIPVPEAGRKQTGTIIVSVPDAVFSVDNPEHVEIANRIEIRLVDQDLLPA
FADL
>Mature_244_residues
MEIVAQFRSPADFAPLGDFAAHLVRLWPVVEAMSREDERLGQWWLKADTEEEARLYPMYEAPGIPSTAVLAVLAQRYAKK
MDLPKVFGFWNGQMDAANSARLKLAIDAKRRPSEVEIGLPAQSAVSTDERSYEGMAKIVSAMVTVYDPMYVSVSPREYFP
RQVFDDKPGVGWMLYLPKPLTAQQVPEARELIPVPEAGRKQTGTIIVSVPDAVFSVDNPEHVEIANRIEIRLVDQDLLPA
FADL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27303; Mature: 27303

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIVAQFRSPADFAPLGDFAAHLVRLWPVVEAMSREDERLGQWWLKADTEEEARLYPMYE
CCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEEC
APGIPSTAVLAVLAQRYAKKMDLPKVFGFWNGQMDAANSARLKLAIDAKRRPSEVEIGLP
CCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEECCC
AQSAVSTDERSYEGMAKIVSAMVTVYDPMYVSVSPREYFPRQVFDDKPGVGWMLYLPKPL
CHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEECCHHHCCHHHCCCCCCCEEEEEECCCC
TAQQVPEARELIPVPEAGRKQTGTIIVSVPDAVFSVDNPEHVEIANRIEIRLVDQDLLPA
CHHHCCCHHHCCCCCCCCCCCCCEEEEECCHHEEECCCCCCEEEECEEEEEEECHHHHHH
FADL
HHCC
>Mature Secondary Structure
MEIVAQFRSPADFAPLGDFAAHLVRLWPVVEAMSREDERLGQWWLKADTEEEARLYPMYE
CCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEEC
APGIPSTAVLAVLAQRYAKKMDLPKVFGFWNGQMDAANSARLKLAIDAKRRPSEVEIGLP
CCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEECCC
AQSAVSTDERSYEGMAKIVSAMVTVYDPMYVSVSPREYFPRQVFDDKPGVGWMLYLPKPL
CHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEECCHHHCCHHHCCCCCCCEEEEEECCCC
TAQQVPEARELIPVPEAGRKQTGTIIVSVPDAVFSVDNPEHVEIANRIEIRLVDQDLLPA
CHHHCCCHHHCCCCCCCCCCCCCEEEEECCHHEEECCCCCCEEEECEEEEEEECHHHHHH
FADL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA