| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351899
Identifier: 115351899
GI number: 115351899
Start: 2032541
End: 2032909
Strand: Direct
Name: 115351899
Synonym: Bamb_1848
Alternate gene names: NA
Gene position: 2032541-2032909 (Clockwise)
Preceding gene: 115351898
Following gene: 115351900
Centisome position: 57.15
GC content: 53.66
Gene sequence:
>369_bases ATGCAGCGCCGCAACTGGAGCATGAGTGACAACTCCCGAGAGTATCAAGGCCGAATTACCGGGTTCCCCTATAGCGTTGA AGAGGCCTGGAGCATGGAGTGGGTCTGGCAGCGCGACTTCGACGGCTTTCGACCGGAAAGCTGTTTGTTGATAGAAGCAA AGGGAAAGTACGATCAGTTCTTGAAGAAGGACGATGTACCGTACACCAAGGCCTTTGATGACATGGAAGAGCAGGCTGGA GCTCAGGCTGCGGTTGTCGATGATCATCCTCCGGCGAGGTTGAAATGGTATTTTCAGACGGAGCGGACTTGGAAGTACAT GAGAACGCCGCTTGCCCGTCTTAGCGTTGAATCAGAATGGGTGCCCTGA
Upstream 100 bases:
>100_bases GGGTGACACCCAAAAGGACGAAAGCAAGGCAAAGCCGGACGTCCGGGCGATTCCGCGCACCGGTGAGAGCTGCAAGAAGT GCCCGCCTGAGACGGGGAGT
Downstream 100 bases:
>100_bases CAAACATGGAAATAGTTGCGCAATTTCGTAGCCCTGCCGATTTCGCTCCGCTTGGCGATTTTGCTGCTCATCTGGTCCGT CTATGGCCGGTGGTTGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MQRRNWSMSDNSREYQGRITGFPYSVEEAWSMEWVWQRDFDGFRPESCLLIEAKGKYDQFLKKDDVPYTKAFDDMEEQAG AQAAVVDDHPPARLKWYFQTERTWKYMRTPLARLSVESEWVP
Sequences:
>Translated_122_residues MQRRNWSMSDNSREYQGRITGFPYSVEEAWSMEWVWQRDFDGFRPESCLLIEAKGKYDQFLKKDDVPYTKAFDDMEEQAG AQAAVVDDHPPARLKWYFQTERTWKYMRTPLARLSVESEWVP >Mature_122_residues MQRRNWSMSDNSREYQGRITGFPYSVEEAWSMEWVWQRDFDGFRPESCLLIEAKGKYDQFLKKDDVPYTKAFDDMEEQAG AQAAVVDDHPPARLKWYFQTERTWKYMRTPLARLSVESEWVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14641; Mature: 14641
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRNWSMSDNSREYQGRITGFPYSVEEAWSMEWVWQRDFDGFRPESCLLIEAKGKYDQF CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCHHHH LKKDDVPYTKAFDDMEEQAGAQAAVVDDHPPARLKWYFQTERTWKYMRTPLARLSVESEW HCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCHHHHHHCHHHHHCCCCCC VP CC >Mature Secondary Structure MQRRNWSMSDNSREYQGRITGFPYSVEEAWSMEWVWQRDFDGFRPESCLLIEAKGKYDQF CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCHHHH LKKDDVPYTKAFDDMEEQAGAQAAVVDDHPPARLKWYFQTERTWKYMRTPLARLSVESEW HCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCHHHHHHCHHHHHCCCCCC VP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA