| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351895
Identifier: 115351895
GI number: 115351895
Start: 2030369
End: 2030860
Strand: Direct
Name: 115351895
Synonym: Bamb_1844
Alternate gene names: NA
Gene position: 2030369-2030860 (Clockwise)
Preceding gene: 115351893
Following gene: 115351896
Centisome position: 57.09
GC content: 60.16
Gene sequence:
>492_bases GTGTTTTTATACAGTATTTCAGCCGTGATCAAACCACAGTGGGCCTACATCTGGGAGTACGGATTCCAGGGCGACAATGC GCGCCTGAGGACGCCGATCGAGCTCACGAAACGTGAATTTGAGTCGTGGGTCGACAAGGACCCGCGGTCGGCGTTCCTCG GCACATGCGCGCCGGTCGAGTCGACCAGAATTGACCGCAACCGCGTCCCGCTCACGGACCCGCGATTCAAGTTGCGGCCG GTGGTGCCGGAATTTGATGCGCCCACCGAGGACGAACTTCGCGCGCTGTGGCGCGAGTACACCGACCTTCAAGTCCGATG GTTGATCCTGGAGATCCGCGCCCTTCGGAAATCGCTCGAGCGCGTCGAGGAGTGGTACGCGTACACCGACAAGAACGTTG CGAACAAAGGTGACCTCGCCGGAGCGCAAGGGCAGTTGCATCGGTTGATGCATCTACTGCGCGAGGAAATGAGGCGCGCG GGAATGAGGTAA
Upstream 100 bases:
>100_bases TCGCTGAGACCGGGATCCTCGCCGGGCGCTACGTAGTTCGTGCACATCGCCGCCCCCTGTTTTTCGTTCTTGACCGAACC ATCATACCCCGCGCTACACT
Downstream 100 bases:
>100_bases GGCTAAGTCAATTGCTGGCTAGTAGTCTGCTCGCTGCACCATCTGCTGCGCGCCGAGAAGGGTCGGGCCGGGATGCTCAA ACCCCAATGCTTCCCTACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MFLYSISAVIKPQWAYIWEYGFQGDNARLRTPIELTKREFESWVDKDPRSAFLGTCAPVESTRIDRNRVPLTDPRFKLRP VVPEFDAPTEDELRALWREYTDLQVRWLILEIRALRKSLERVEEWYAYTDKNVANKGDLAGAQGQLHRLMHLLREEMRRA GMR
Sequences:
>Translated_163_residues MFLYSISAVIKPQWAYIWEYGFQGDNARLRTPIELTKREFESWVDKDPRSAFLGTCAPVESTRIDRNRVPLTDPRFKLRP VVPEFDAPTEDELRALWREYTDLQVRWLILEIRALRKSLERVEEWYAYTDKNVANKGDLAGAQGQLHRLMHLLREEMRRA GMR >Mature_163_residues MFLYSISAVIKPQWAYIWEYGFQGDNARLRTPIELTKREFESWVDKDPRSAFLGTCAPVESTRIDRNRVPLTDPRFKLRP VVPEFDAPTEDELRALWREYTDLQVRWLILEIRALRKSLERVEEWYAYTDKNVANKGDLAGAQGQLHRLMHLLREEMRRA GMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19355; Mature: 19355
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLYSISAVIKPQWAYIWEYGFQGDNARLRTPIELTKREFESWVDKDPRSAFLGTCAPVE CCEEEEHHHHCCCHHEEEEECCCCCCCEECCHHHHHHHHHHHHHCCCCCHHHHCCCCCCC STRIDRNRVPLTDPRFKLRPVVPEFDAPTEDELRALWREYTDLQVRWLILEIRALRKSLE CCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH RVEEWYAYTDKNVANKGDLAGAQGQLHRLMHLLREEMRRAGMR HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFLYSISAVIKPQWAYIWEYGFQGDNARLRTPIELTKREFESWVDKDPRSAFLGTCAPVE CCEEEEHHHHCCCHHEEEEECCCCCCCEECCHHHHHHHHHHHHHCCCCCHHHHCCCCCCC STRIDRNRVPLTDPRFKLRPVVPEFDAPTEDELRALWREYTDLQVRWLILEIRALRKSLE CCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH RVEEWYAYTDKNVANKGDLAGAQGQLHRLMHLLREEMRRAGMR HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA