Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351896

Identifier: 115351896

GI number: 115351896

Start: 2031059

End: 2031466

Strand: Direct

Name: 115351896

Synonym: Bamb_1845

Alternate gene names: NA

Gene position: 2031059-2031466 (Clockwise)

Preceding gene: 115351895

Following gene: 115351897

Centisome position: 57.11

GC content: 66.67

Gene sequence:

>408_bases
ATGGCCCGAGCCATGATCTGCGTCGGCGACACGACGACGCACGGGGGCCGCGTGCTGGAGGGCACCGCGACCGCCACCAT
TGACGGGAAACCCATCGCCGGCGTCGGACACAAGGTACTTTGCCCACAATGCAAAGGCGTCTTTCCGATCCTGCCCGCGA
CGGGACGGCGCTACCCGCATCAAATCGCCGGCCGGGAAACCGCCATCGAAGGCATGAAGACCGCTTGCGGGGCGACGCTG
ATCGCCTCGCAATCGTCCGCGACACTCGACGACGTCGGAGCCGGTGAAGCGACGACGGGCGCTGCAGTCGCCAACGCTGC
AGCAGCGCTGGCCCCTTCACCTACGCTCTGCCTCGAATGCCTGAAGTCCGCGGCCGAAAATGCTGCAACGATGATCGCGC
GCGGGTAG

Upstream 100 bases:

>100_bases
TCGATTAACAATCGTTGACCGACTGCGCGACGGCCAGCGGCTGCTCCCCCTCTTCCGGAAATGGTAAATTCATACGAAAA
CCACACCTACGAGAGAACAT

Downstream 100 bases:

>100_bases
AACCATGACCGGCAATTCGATCGAAGCGTTCTACTTCACGCGGCAACAGCAGTTGACCATGCAGGTGCACTTGTACGCGC
TGGTCGACGGTCTCCTGTTC

Product: PAAR repeat-containing protein

Products: NA

Alternate protein names: PAAR Motif Family; Bacteriophage; PAAR Motif Family Protein; PaaR Motif-Containing Protein; Paar Repeat-Containing Protein; PAAR Motif-Containing Protein

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MARAMICVGDTTTHGGRVLEGTATATIDGKPIAGVGHKVLCPQCKGVFPILPATGRRYPHQIAGRETAIEGMKTACGATL
IASQSSATLDDVGAGEATTGAAVANAAAALAPSPTLCLECLKSAAENAATMIARG

Sequences:

>Translated_135_residues
MARAMICVGDTTTHGGRVLEGTATATIDGKPIAGVGHKVLCPQCKGVFPILPATGRRYPHQIAGRETAIEGMKTACGATL
IASQSSATLDDVGAGEATTGAAVANAAAALAPSPTLCLECLKSAAENAATMIARG
>Mature_134_residues
ARAMICVGDTTTHGGRVLEGTATATIDGKPIAGVGHKVLCPQCKGVFPILPATGRRYPHQIAGRETAIEGMKTACGATLI
ASQSSATLDDVGAGEATTGAAVANAAAALAPSPTLCLECLKSAAENAATMIARG

Specific function: Unknown

COG id: COG4104

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13391; Mature: 13259

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARAMICVGDTTTHGGRVLEGTATATIDGKPIAGVGHKVLCPQCKGVFPILPATGRRYPH
CCCEEEEECCCCCCCCEEEECCEEEEECCCCCCCCCCEEECCCCCCCEECCCCCCCCCCH
QIAGRETAIEGMKTACGATLIASQSSATLDDVGAGEATTGAAVANAAAALAPSPTLCLEC
HHCCCHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHH
LKSAAENAATMIARG
HHHHHHHHHHHEECC
>Mature Secondary Structure 
ARAMICVGDTTTHGGRVLEGTATATIDGKPIAGVGHKVLCPQCKGVFPILPATGRRYPH
CCEEEEECCCCCCCCEEEECCEEEEECCCCCCCCCCEEECCCCCCCEECCCCCCCCCCH
QIAGRETAIEGMKTACGATLIASQSSATLDDVGAGEATTGAAVANAAAALAPSPTLCLEC
HHCCCHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHH
LKSAAENAATMIARG
HHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA