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The map label for this gene is yccA [C]

Identifier: 115351805

GI number: 115351805

Start: 1939985

End: 1940683

Strand: Direct

Name: yccA [C]

Synonym: Bamb_1754

Alternate gene names: 115351805

Gene position: 1939985-1940683 (Clockwise)

Preceding gene: 115351787

Following gene: 115351807

Centisome position: 54.55

GC content: 63.95

Gene sequence:

>699_bases
ATGAACGACTATCCGTACAATTTCGGCCGCGGCGGTTCCGTCAGCACCGCCGAAGTTCGTAACCGCGTGCTGCGGAACAC
GTACTGGCTGCTCGCGCTGTCGATGGTGCCGACCGTGCTGGGCGCCTGGGTCGGCGTCGCGACGGGCTTCTCGCTGTTCG
CGGCCACGAGCCCGATGATGAGCCTGCTCGCGTTCTTCGCGATCGCGTTCGGCTTCATGTTCGCGATCGAGCGGACGAAA
AACAGCGCGGCCGGCGTGTTCGTGCTGCTCGGCTTCACGTTCTTCATGGGCCTGATGCTGTCGCGGCTGCTCAGCTTCAT
CCTCGGCTTCTCGAACGGCCCGTCGCTGATCATGCTCGCGTTCGGCGGCACCGGCATCATCTTCGCCTCGATGGCGACGA
TCGCCACCGTCAGCAAGCGCGACTTCTCGGGGCTCGGCAAGTGGCTGTTCATGGGCGTGATCGTGATCCTGCTGGCGTCG
GTCGCGAACATCTTCCTGCAGCTGCCGGCGCTGATGCTCACCGTCTCGGTGCTCGCGATCGCGATCTTCTCGGCCTACAT
GCTGTTCGACGTGCAGCGCGTCGTGAACGGCGGCGAGACGAACTACATCTCGGCCACGCTCGCGATCTACCTCGACCTGT
ACAACGTGTTCACGAACCTGCTCGCGCTGCTCGGCATCTTCGGCGGCAACCGCAACTGA

Upstream 100 bases:

>100_bases
CGGAACGTATCTTAGCCATAGCTGCCCCGGTTTGCTGCGCCGCACATCGCGCGCGCCGAACCGGCCCCGGACGCCCACGC
GTTCAATGTTAGGAGAAACC

Downstream 100 bases:

>100_bases
CGTTCGCACCACCCCATGAAAAACCGGCCCGCGGGCCGGTTTTTTTACGTCCGACGCCCGCCCGCTCAGCCGCGCTCGAA
CAGCGCGATCGATTCGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MNDYPYNFGRGGSVSTAEVRNRVLRNTYWLLALSMVPTVLGAWVGVATGFSLFAATSPMMSLLAFFAIAFGFMFAIERTK
NSAAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLAFGGTGIIFASMATIATVSKRDFSGLGKWLFMGVIVILLAS
VANIFLQLPALMLTVSVLAIAIFSAYMLFDVQRVVNGGETNYISATLAIYLDLYNVFTNLLALLGIFGGNRN

Sequences:

>Translated_232_residues
MNDYPYNFGRGGSVSTAEVRNRVLRNTYWLLALSMVPTVLGAWVGVATGFSLFAATSPMMSLLAFFAIAFGFMFAIERTK
NSAAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLAFGGTGIIFASMATIATVSKRDFSGLGKWLFMGVIVILLAS
VANIFLQLPALMLTVSVLAIAIFSAYMLFDVQRVVNGGETNYISATLAIYLDLYNVFTNLLALLGIFGGNRN
>Mature_232_residues
MNDYPYNFGRGGSVSTAEVRNRVLRNTYWLLALSMVPTVLGAWVGVATGFSLFAATSPMMSLLAFFAIAFGFMFAIERTK
NSAAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLAFGGTGIIFASMATIATVSKRDFSGLGKWLFMGVIVILLAS
VANIFLQLPALMLTVSVLAIAIFSAYMLFDVQRVVNGGETNYISATLAIYLDLYNVFTNLLALLGIFGGNRN

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787205, Length=205, Percent_Identity=38.0487804878049, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1787004, Length=116, Percent_Identity=37.0689655172414, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 25042; Mature: 25042

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDYPYNFGRGGSVSTAEVRNRVLRNTYWLLALSMVPTVLGAWVGVATGFSLFAATSPMM
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLAFFAIAFGFMFAIERTKNSAAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
FGGTGIIFASMATIATVSKRDFSGLGKWLFMGVIVILLASVANIFLQLPALMLTVSVLAI
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIFSAYMLFDVQRVVNGGETNYISATLAIYLDLYNVFTNLLALLGIFGGNRN
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNDYPYNFGRGGSVSTAEVRNRVLRNTYWLLALSMVPTVLGAWVGVATGFSLFAATSPMM
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLAFFAIAFGFMFAIERTKNSAAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
FGGTGIIFASMATIATVSKRDFSGLGKWLFMGVIVILLASVANIFLQLPALMLTVSVLAI
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIFSAYMLFDVQRVVNGGETNYISATLAIYLDLYNVFTNLLALLGIFGGNRN
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]