| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is kgtP [H]
Identifier: 115351566
GI number: 115351566
Start: 1659911
End: 1661215
Strand: Direct
Name: kgtP [H]
Synonym: Bamb_1513
Alternate gene names: 115351566
Gene position: 1659911-1661215 (Clockwise)
Preceding gene: 115351565
Following gene: 115351567
Centisome position: 46.67
GC content: 65.75
Gene sequence:
>1305_bases ATGGACGTCCAGACCGACCAAGCTGCGCTGTCCGCGCATGACACCCGGCGGCGCGTGTTCGCCATCGTCGGCGCCTCATC GGGCAACCTCGTCGAGTGGTTCGACTTCTACATTTACTCGTTCTGCGCGCTGTACTTCGCGCCGGCGTTCTTCCCGAGCG GCAACTCGACGACGCAGTTGCTGAACACGGCCGGCGTGTTCGCGGCCGGTTTCCTGATGCGTCCGATCGGCGGCTGGCTG TTCGGCCGCATCGCCGACCGTCACGGCCGCCGCGCGGCGATGATGATCTCGGTGCTGATGATGTGCGGCGGCTCGCTCGT GATCGCGGTCCTGCCGACCTATGCGCAGATCGGCGCGCTCGCGCCGGCGCTGCTGCTGGTCGCGCGTCTGTTCCAGGGGC TGTCGGTGGGCGGCGAATACGGGACGAGCGCGACCTACATGAGCGAGGTCGCGCTGAAGGGGCGGCGCGGCTTCTTCGCG TCGTTCCAGTACGTGACGCTGATCGGCGGCCAGCTGTGTGCGCTGCTGGTGCTCGTGATCCTGCAGCAGACGCTGTCGAC TGACGAACTGAAGGCGTGGGGCTGGCGCATTCCGTTCGTCTGCGGCGCGGCGGCCGCGCTGATCTCGCTGTACCTGCGCA AATCGCTCGACGAGACGTCGACGAGCGCATCGCGCGACAAGAAGGACGCGGGCACGATCCGCGGCGTGTGGCAGCACAAG GGCGCATTCTTCACGGTGGTCGGCTTCACGGCCGGCGGCTCGCTGATCTTCTATACGTTCACGACGTACATGCAGAAGTA CTTGGTGAACACGGCCGGCATGCATGCGAAGACGGCCAGCAACGTGATGACCGTCGCGCTCCTCGTCTACATGCTGATAC AGCCGGTGTTCGGCGCGCTGTCCGACAAGATCGGCCGCCGCACGTCGATGATCCTGTTCGGCACGTTCGCGGTGATCGGC ACGGTGCCGCTGATGCACACGCTGAAGACCGTGACGAGCCCGATGGCCGCGTTCGTGCTGATCACGATCGCGCTGGCGAT CGTCAGCTTCTACACGTCGATCAGCGGCCTCATCAAGGCCGAGATGTTCCCGCCCGAAGTGCGCGCGATGGGCGTCGGCC TGTCGTATGCGGTCGCGAACGCGATCTTCGGCGGCTCGGCCGAATACGTCGCGCTGTGGTTCAAGTCGGTCGGCAGCGAG GAAACCTTCTACTGGTACGTGACGGCGCTGTGCGCGGTGTCGCTGATCGTGTCGTGGCGGATGCGCGACCCGAGCAAGGA AGGGTATCTGCGTCACGAGCCGTGA
Upstream 100 bases:
>100_bases ATCCCGTAGCGCCGTGGCACCGGAACCGGTGCCACGTCGACCGCACGCGGCGGCCCCAGGTCGTCTCGCCCAGAAAGCAC TAAAAGGAACAGACCAACCC
Downstream 100 bases:
>100_bases TCGACGGGGCAACCCGGCTGCCGCTTCGAGCGGCATGAAACAACGCAACGGCGCTCCGCCACGCAGGCGGCGCGCCGTTT TTTCATGGGCGGCGCGTTTG
Product: major facilitator superfamily metabolite/H(+) symporter
Products: Proton [Cytoplasm]; 2-oxoglutarate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MDVQTDQAALSAHDTRRRVFAIVGASSGNLVEWFDFYIYSFCALYFAPAFFPSGNSTTQLLNTAGVFAAGFLMRPIGGWL FGRIADRHGRRAAMMISVLMMCGGSLVIAVLPTYAQIGALAPALLLVARLFQGLSVGGEYGTSATYMSEVALKGRRGFFA SFQYVTLIGGQLCALLVLVILQQTLSTDELKAWGWRIPFVCGAAAALISLYLRKSLDETSTSASRDKKDAGTIRGVWQHK GAFFTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASNVMTVALLVYMLIQPVFGALSDKIGRRTSMILFGTFAVIG TVPLMHTLKTVTSPMAAFVLITIALAIVSFYTSISGLIKAEMFPPEVRAMGVGLSYAVANAIFGGSAEYVALWFKSVGSE ETFYWYVTALCAVSLIVSWRMRDPSKEGYLRHEP
Sequences:
>Translated_434_residues MDVQTDQAALSAHDTRRRVFAIVGASSGNLVEWFDFYIYSFCALYFAPAFFPSGNSTTQLLNTAGVFAAGFLMRPIGGWL FGRIADRHGRRAAMMISVLMMCGGSLVIAVLPTYAQIGALAPALLLVARLFQGLSVGGEYGTSATYMSEVALKGRRGFFA SFQYVTLIGGQLCALLVLVILQQTLSTDELKAWGWRIPFVCGAAAALISLYLRKSLDETSTSASRDKKDAGTIRGVWQHK GAFFTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASNVMTVALLVYMLIQPVFGALSDKIGRRTSMILFGTFAVIG TVPLMHTLKTVTSPMAAFVLITIALAIVSFYTSISGLIKAEMFPPEVRAMGVGLSYAVANAIFGGSAEYVALWFKSVGSE ETFYWYVTALCAVSLIVSWRMRDPSKEGYLRHEP >Mature_434_residues MDVQTDQAALSAHDTRRRVFAIVGASSGNLVEWFDFYIYSFCALYFAPAFFPSGNSTTQLLNTAGVFAAGFLMRPIGGWL FGRIADRHGRRAAMMISVLMMCGGSLVIAVLPTYAQIGALAPALLLVARLFQGLSVGGEYGTSATYMSEVALKGRRGFFA SFQYVTLIGGQLCALLVLVILQQTLSTDELKAWGWRIPFVCGAAAALISLYLRKSLDETSTSASRDKKDAGTIRGVWQHK GAFFTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASNVMTVALLVYMLIQPVFGALSDKIGRRTSMILFGTFAVIG TVPLMHTLKTVTSPMAAFVLITIALAIVSFYTSISGLIKAEMFPPEVRAMGVGLSYAVANAIFGGSAEYVALWFKSVGSE ETFYWYVTALCAVSLIVSWRMRDPSKEGYLRHEP
Specific function: Uptake of alpha-ketoglutarate across the boundary membrane with the concomitant import of a cation (symport system) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1788942, Length=422, Percent_Identity=69.4312796208531, Blast_Score=571, Evalue=1e-164, Organism=Escherichia coli, GI1790550, Length=423, Percent_Identity=28.8416075650118, Blast_Score=187, Evalue=1e-48, Organism=Escherichia coli, GI1788292, Length=435, Percent_Identity=28.0459770114943, Blast_Score=176, Evalue=2e-45, Organism=Escherichia coli, GI1789941, Length=412, Percent_Identity=31.5533980582524, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI87082231, Length=325, Percent_Identity=26.1538461538462, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI87082404, Length=312, Percent_Identity=25.6410256410256, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 47106; Mature: 47106
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVQTDQAALSAHDTRRRVFAIVGASSGNLVEWFDFYIYSFCALYFAPAFFPSGNSTTQL CCCCCHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LNTAGVFAAGFLMRPIGGWLFGRIADRHGRRAAMMISVLMMCGGSLVIAVLPTYAQIGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH APALLLVARLFQGLSVGGEYGTSATYMSEVALKGRRGFFASFQYVTLIGGQLCALLVLVI HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LQQTLSTDELKAWGWRIPFVCGAAAALISLYLRKSLDETSTSASRDKKDAGTIRGVWQHK HHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC GAFFTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASNVMTVALLVYMLIQPVFGAL CCEEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SDKIGRRTSMILFGTFAVIGTVPLMHTLKTVTSPMAAFVLITIALAIVSFYTSISGLIKA HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMFPPEVRAMGVGLSYAVANAIFGGSAEYVALWFKSVGSEETFYWYVTALCAVSLIVSWR CCCCCHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH MRDPSKEGYLRHEP CCCCCCCCCCCCCC >Mature Secondary Structure MDVQTDQAALSAHDTRRRVFAIVGASSGNLVEWFDFYIYSFCALYFAPAFFPSGNSTTQL CCCCCHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LNTAGVFAAGFLMRPIGGWLFGRIADRHGRRAAMMISVLMMCGGSLVIAVLPTYAQIGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH APALLLVARLFQGLSVGGEYGTSATYMSEVALKGRRGFFASFQYVTLIGGQLCALLVLVI HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LQQTLSTDELKAWGWRIPFVCGAAAALISLYLRKSLDETSTSASRDKKDAGTIRGVWQHK HHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC GAFFTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASNVMTVALLVYMLIQPVFGAL CCEEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SDKIGRRTSMILFGTFAVIGTVPLMHTLKTVTSPMAAFVLITIALAIVSFYTSISGLIKA HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMFPPEVRAMGVGLSYAVANAIFGGSAEYVALWFKSVGSEETFYWYVTALCAVSLIVSWR CCCCCHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH MRDPSKEGYLRHEP CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 2-oxoglutarate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 2-oxoglutarate [Periplasm] = Proton [Cytoplasm] + 2-oxoglutarate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2118499; 9205837; 9278503; 1709493; 2190187; 2053984; 8419306 [H]