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The map label for this gene is ycgB [H]

Identifier: 115351565

GI number: 115351565

Start: 1657996

End: 1659675

Strand: Direct

Name: ycgB [H]

Synonym: Bamb_1512

Alternate gene names: 115351565

Gene position: 1657996-1659675 (Clockwise)

Preceding gene: 115351564

Following gene: 115351566

Centisome position: 46.62

GC content: 63.04

Gene sequence:

>1680_bases
ATGACGACCCGCCATCTGCACAACGAGTCGCGCGGCTACGCGCCGCGCCCTTCCGGCGACGCCACGGCCGGCCCTGCCGC
ATCGCAGCAAAGCGGCCGGGTCGAACCGGCGCCGCCGGCCGCCGACTTGCCCGGCTCCGGGCAGAAGGAAGCGCGTATGA
ACGTTGCCGAACGCAAGCCGCTGCCGTGCCCGTCCGACTGGACGTTCGAACTGCTCGAGGAATACGACACGCACATCTCG
CAGGTCGCCGAGCAATACGAGCTCGATATCTATCCGATCCAGCTCGAACTGATCAGCGCCGAGCAGATGATGGACGCGTA
CGCGTCGGTCGGGATGCCGGTCAACTATCGCCACTGGTCGTTCGGCAAGCACTTCCTCGCCACCGAAAAGAGCTATCGCC
GCGGCCAGATGGGCCTCGCGTACGAAATCGTCATCAACTCGAACCCGTGCATCGCGTATCTGATGGAAGAGAACACGATG
ACGATGCAGGCGCTCGTCATCGCGCACGCGGCGTACGGGCACAACTCCTTCTTCAAGGGCAACTACCTGTTCCGGCTGTG
GACCGACGCGCACGCGATCATCGACTATCTCGTGTACGCGAAGAACTACGTCGCCGAATGCGAGGAGCGCTACGGCCTCG
ATCGCGTCGAGGAACTGCTCGATTCGTGCCATGCGCTGATGAACTACGGCGTCGACCGCTACAAGCGGCCGCAGAAACCG
TCGCTGTCGAAGGAGGCCGCGCTGCGGCGCGAGCGCGAGGCGTATCTGCAGTCGCAGGTCAACGAGCTGTGGCGCACGCT
GCCGGGCAAGAAGCCCGAGCAAATGGAAGAGCAGGAGGAACGCTATCCGCCGGAGCCGCAGGAGAACCTGCTGTATTTCG
CGGAGAAGAACGCGCCGCTGCTCGAGCCGTGGGAGCGGGAAGTGATCCGCATCGTGCGCAAGATCGGCCAGTACTTCTAT
CCGCAGCGGCAGACGCAGGTGATGAACGAGGGTTGGGCGACGTTCTGGCACTACACGCTGCTGAACACGCTGTACAACCA
GGGCAAGCTGGAAGACGGCTTCATGATGGAGTTCCTGCATTCGCACAGCAACGTGGTCTATCAGCCGCCCGTCACGAAGC
CGTACTACAACGGGATCAACCCGTATGCGCTCGGCTTCTCGATGATGAGCGACATCCGGCGGATCTGCGAAGCACCGACG
GAAGAGGACTACAAGTGGTTTCCGGAGATCGCGGGCACCCCGTGGCTGCCGGCGATGCACTACGCGATGCGCAACTTCAA
GGACGAGAGCTTCATCGCGCAGTACCTGTCGCCGAACCTGATCCGCGAGATGCGGCTGTTCTCGGTGCTCGACGACGACA
TGCGCGATTCGCTCGAGGTGTCGGCGATCCACGACGAGGCCGGTTATCAATACGTGCGGCAGGCGTTGTCGCGGCAGTAC
GACATCCATCATCGCGAGCCGAACATCCAGGTCTGGGCCGTGAACACGCGCGGCGACCGCAGCCTCACGCTGCGCCACTT
CATGACCGACAACCGCCATCTGTCGAACGACAGCGAAGAAGTGCTCAAGCACATGGCGCGACTCTGGCAGTTCGACGTGT
TCCTGGAAAGCGTCGACGAGGCCGGTACCGTGCGCAAGCGCTACGAGTGCCGCTACGTGCCGCCCGAGGTGCGTATCTGA

Upstream 100 bases:

>100_bases
TGGCGCTGTCGCAACCGCACCTCGCGATGAAGAAAGCCGAATCGGCTGCCGACATTTACCCGGTGTTTCGCGAATTGTTC
GAAAAGCAGGTGGAAATGTC

Downstream 100 bases:

>100_bases
ATCGCTCGCCTCCGCAGAGCTTGCATCGGACGCCAGCCTGACGGCTGGCGTTTTCATATGACGAATGGGGCGAACGAGAA
AATTTTTCTACATCCGGACG

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 558

Protein sequence:

>559_residues
MTTRHLHNESRGYAPRPSGDATAGPAASQQSGRVEPAPPAADLPGSGQKEARMNVAERKPLPCPSDWTFELLEEYDTHIS
QVAEQYELDIYPIQLELISAEQMMDAYASVGMPVNYRHWSFGKHFLATEKSYRRGQMGLAYEIVINSNPCIAYLMEENTM
TMQALVIAHAAYGHNSFFKGNYLFRLWTDAHAIIDYLVYAKNYVAECEERYGLDRVEELLDSCHALMNYGVDRYKRPQKP
SLSKEAALRREREAYLQSQVNELWRTLPGKKPEQMEEQEERYPPEPQENLLYFAEKNAPLLEPWEREVIRIVRKIGQYFY
PQRQTQVMNEGWATFWHYTLLNTLYNQGKLEDGFMMEFLHSHSNVVYQPPVTKPYYNGINPYALGFSMMSDIRRICEAPT
EEDYKWFPEIAGTPWLPAMHYAMRNFKDESFIAQYLSPNLIREMRLFSVLDDDMRDSLEVSAIHDEAGYQYVRQALSRQY
DIHHREPNIQVWAVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQFDVFLESVDEAGTVRKRYECRYVPPEVRI

Sequences:

>Translated_559_residues
MTTRHLHNESRGYAPRPSGDATAGPAASQQSGRVEPAPPAADLPGSGQKEARMNVAERKPLPCPSDWTFELLEEYDTHIS
QVAEQYELDIYPIQLELISAEQMMDAYASVGMPVNYRHWSFGKHFLATEKSYRRGQMGLAYEIVINSNPCIAYLMEENTM
TMQALVIAHAAYGHNSFFKGNYLFRLWTDAHAIIDYLVYAKNYVAECEERYGLDRVEELLDSCHALMNYGVDRYKRPQKP
SLSKEAALRREREAYLQSQVNELWRTLPGKKPEQMEEQEERYPPEPQENLLYFAEKNAPLLEPWEREVIRIVRKIGQYFY
PQRQTQVMNEGWATFWHYTLLNTLYNQGKLEDGFMMEFLHSHSNVVYQPPVTKPYYNGINPYALGFSMMSDIRRICEAPT
EEDYKWFPEIAGTPWLPAMHYAMRNFKDESFIAQYLSPNLIREMRLFSVLDDDMRDSLEVSAIHDEAGYQYVRQALSRQY
DIHHREPNIQVWAVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQFDVFLESVDEAGTVRKRYECRYVPPEVRI
>Mature_558_residues
TTRHLHNESRGYAPRPSGDATAGPAASQQSGRVEPAPPAADLPGSGQKEARMNVAERKPLPCPSDWTFELLEEYDTHISQ
VAEQYELDIYPIQLELISAEQMMDAYASVGMPVNYRHWSFGKHFLATEKSYRRGQMGLAYEIVINSNPCIAYLMEENTMT
MQALVIAHAAYGHNSFFKGNYLFRLWTDAHAIIDYLVYAKNYVAECEERYGLDRVEELLDSCHALMNYGVDRYKRPQKPS
LSKEAALRREREAYLQSQVNELWRTLPGKKPEQMEEQEERYPPEPQENLLYFAEKNAPLLEPWEREVIRIVRKIGQYFYP
QRQTQVMNEGWATFWHYTLLNTLYNQGKLEDGFMMEFLHSHSNVVYQPPVTKPYYNGINPYALGFSMMSDIRRICEAPTE
EDYKWFPEIAGTPWLPAMHYAMRNFKDESFIAQYLSPNLIREMRLFSVLDDDMRDSLEVSAIHDEAGYQYVRQALSRQYD
IHHREPNIQVWAVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQFDVFLESVDEAGTVRKRYECRYVPPEVRI

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=492, Percent_Identity=65.2439024390244, Blast_Score=702, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 65407; Mature: 65275

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRHLHNESRGYAPRPSGDATAGPAASQQSGRVEPAPPAADLPGSGQKEARMNVAERKP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCC
LPCPSDWTFELLEEYDTHISQVAEQYELDIYPIQLELISAEQMMDAYASVGMPVNYRHWS
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHHHHCCCCCCCCCCC
FGKHFLATEKSYRRGQMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHAAYGHNSFFKG
CCCHHHHCCHHHHCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEECC
NYLFRLWTDAHAIIDYLVYAKNYVAECEERYGLDRVEELLDSCHALMNYGVDRYKRPQKP
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCCCC
SLSKEAALRREREAYLQSQVNELWRTLPGKKPEQMEEQEERYPPEPQENLLYFAEKNAPL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHCEEEEECCCCCC
LEPWEREVIRIVRKIGQYFYPQRQTQVMNEGWATFWHYTLLNTLYNQGKLEDGFMMEFLH
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SHSNVVYQPPVTKPYYNGINPYALGFSMMSDIRRICEAPTEEDYKWFPEIAGTPWLPAMH
HCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHH
YAMRNFKDESFIAQYLSPNLIREMRLFSVLDDDMRDSLEVSAIHDEAGYQYVRQALSRQY
HHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHC
DIHHREPNIQVWAVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQFDVFLESVDE
CCCCCCCCEEEEEEECCCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AGTVRKRYECRYVPPEVRI
HHHHHHHCCCEECCCCCCC
>Mature Secondary Structure 
TTRHLHNESRGYAPRPSGDATAGPAASQQSGRVEPAPPAADLPGSGQKEARMNVAERKP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCC
LPCPSDWTFELLEEYDTHISQVAEQYELDIYPIQLELISAEQMMDAYASVGMPVNYRHWS
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHHHHCCCCCCCCCCC
FGKHFLATEKSYRRGQMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHAAYGHNSFFKG
CCCHHHHCCHHHHCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEECC
NYLFRLWTDAHAIIDYLVYAKNYVAECEERYGLDRVEELLDSCHALMNYGVDRYKRPQKP
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCCCC
SLSKEAALRREREAYLQSQVNELWRTLPGKKPEQMEEQEERYPPEPQENLLYFAEKNAPL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHCEEEEECCCCCC
LEPWEREVIRIVRKIGQYFYPQRQTQVMNEGWATFWHYTLLNTLYNQGKLEDGFMMEFLH
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SHSNVVYQPPVTKPYYNGINPYALGFSMMSDIRRICEAPTEEDYKWFPEIAGTPWLPAMH
HCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHH
YAMRNFKDESFIAQYLSPNLIREMRLFSVLDDDMRDSLEVSAIHDEAGYQYVRQALSRQY
HHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHC
DIHHREPNIQVWAVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQFDVFLESVDE
CCCCCCCCEEEEEEECCCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AGTVRKRYECRYVPPEVRI
HHHHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]