| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is yeaG [H]
Identifier: 115351563
GI number: 115351563
Start: 1654683
End: 1656605
Strand: Direct
Name: yeaG [H]
Synonym: Bamb_1510
Alternate gene names: 115351563
Gene position: 1654683-1656605 (Clockwise)
Preceding gene: 115351562
Following gene: 115351564
Centisome position: 46.53
GC content: 60.06
Gene sequence:
>1923_bases ATGGATATTTACAGCAGCTTCGCGAACCGCTTCGAAAAAACGCGAGAGGAAGAGCTCTCGCTGGAGGAGTACCTCGCGCT CTGCAAGAACGATCCGTCAGCGTATGCCACGGCAGGCGAACGCATGCTGGCTGCAATCGGGGAACCCGAACAAGTCGACA CCCGCAACGAACCGCGCCTGTCGCGGATCTTCGCGAACAAGGTGATCAAGGTCTATCCCGCATTCCGTGAGTTCTACGGA ATGGAGGAAGTGATCGAGCAGGTGGTCGCGTATTTCCGCCACGCTGCGCAAGGGCTCGAAGAGAAGAAGCAGATTCTCTA CCTGCTTGGCCCGGTGGGCGGCGGCAAGTCGTCGATCGCCGAGCGTCTGAAGCAACTGATGGAGCGCGTGCCGTTCTATG CGCTGAAGGGCTCGCCCGTCAACGAATCGCCGCTCGGGCTGTTCGACTACGACGAAGACGGCCCGATCCTCGAGGAGCAA TACGGCATTCCTCGCCGCTACCTGAAGAGCATCCTGAGTCCGTGGGCGGTCAAGCGCCTGCACGAATACAACGGCGACAT CCGCCAGTTCCGCGTCGTGCGCCGTTACCCGTCGATCCTGCGTCAGGTCGGCATTGCAAAAACGGAGCCGGGCGACGAGA ACAACCAGGATATTTCGTCGCTCGTCGGCAAGGTCGACATCCGCAAGCTCGAGCAGTACGCGCAGGACGATGCCGATGCG TACAGCTATTCGGGCGGCCTGTGCCTCGCGAACCAGGGGCTGCTCGAGTTCGTCGAAATGTTCAAGGCGCCGATCAAGGT GCTGCACCCGTTGCTCACCGCGACGCAGGAAGGCAACTTCAAGGGCACCGAAGGATTCGGCGCGATTCCGTTCGACGGGG TGATCCTCGCGCACTCGAACGAGTCGGAGTGGAAGGCGTTCCGCAACAACCGCAACAACGAGGCACTGCTCGACCGGATC TTCGTCGTGAAGGTGCCGTACTGCCTGCGCGTGTCGGAAGAGACGAAGATCTACGAGAAGCTGATCCGCAATTCGTCGCT GGCCGAAGCCGTGTGCGCGCCGGGCACGCTGAAGATGATGTCGCAGTTCTCGGTGCTGTCGCGCCTGCACGAGCCGGAGA ACTCGAGCCTGTTCTCGAAGATGCAGGTCTATGACGGCGAAAACCTGAAGGACACCGATCCGAAGGCGAAGTCGTATCAG GAGTATCGCGACTATGCGGGTGTGGACGAAGGGATGACGGGCGTATCGACACGCTTCGCATTCAAGATCCTGTCGCGCGT GTTCAACTTCGATTCGAGCGAGGTCGCGGCGAACCCCGTGCACCTGATGTACGTGCTCGAACAGCAGATCGAACGCGAGC AGTTCCCGCCGGAAACCGAGCAGAAGTACCTGTCCTTCGTGAAGGACGTGCTCGCGTCGCGCTACGCGGACTTCATCGGC AAGGAGATCCAGACGGCCTACCTCGAATCGTATTCGGAGTACGGGCAGAACATTTTCGACCGCTACGTCACCTATGCCGA CTTCTGGATCCAGGATCAGGAATTCCGCGATCACGACACGGGCGAGAGCTTCGACCGCGCCGCGCTGAACGCGGAACTGG AGAAGATCGAGAAGCCGGCCGGGATCAGCAATCCGAAGGATTACCGCAACGAGATCGTGAACTTCGTGCTGCGCGCGCGG GCGGCGAACGCCGGGAAGAACCCCGTGTGGACGAGCTACGAGAAGTTGCGCGTCGTGATCGAGAAGAAGATGTTCTCGAA TACCGAGGAACTGTTGCCGGTCATTTCGTTCAACGCGAAGGGCTCGGCAGAGGAGCAACGCAAGCATGAGGACTTTGTGA ATCGGATGGTCGCGAAGGGCTATACGCCGAAGCAGGTGAGGCTGCTTTGCGACTGGTATCTGCGCGTGCGCAAGTCGTCA TGA
Upstream 100 bases:
>100_bases AAAAAAAATAAGAAAGGGTTTAGGATGAATTCGAACGCGCTTGCTTCTGCGCAGTCATACGAAGGCAAGCACGTCTTCAG ACTCAGGCGAGGGAGGTAGC
Downstream 100 bases:
>100_bases CGCGCGCGGTACCGCGCCCGTGCGGTTCGTCCGCGCGGGCGCCCTCAGAGACGCCGCCCGCATGACGGCAGACGGCATGT GCGGCGAGCGTCCCGGCATA
Product: putative serine protein kinase PrkA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MDIYSSFANRFEKTREEELSLEEYLALCKNDPSAYATAGERMLAAIGEPEQVDTRNEPRLSRIFANKVIKVYPAFREFYG MEEVIEQVVAYFRHAAQGLEEKKQILYLLGPVGGGKSSIAERLKQLMERVPFYALKGSPVNESPLGLFDYDEDGPILEEQ YGIPRRYLKSILSPWAVKRLHEYNGDIRQFRVVRRYPSILRQVGIAKTEPGDENNQDISSLVGKVDIRKLEQYAQDDADA YSYSGGLCLANQGLLEFVEMFKAPIKVLHPLLTATQEGNFKGTEGFGAIPFDGVILAHSNESEWKAFRNNRNNEALLDRI FVVKVPYCLRVSEETKIYEKLIRNSSLAEAVCAPGTLKMMSQFSVLSRLHEPENSSLFSKMQVYDGENLKDTDPKAKSYQ EYRDYAGVDEGMTGVSTRFAFKILSRVFNFDSSEVAANPVHLMYVLEQQIEREQFPPETEQKYLSFVKDVLASRYADFIG KEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEFRDHDTGESFDRAALNAELEKIEKPAGISNPKDYRNEIVNFVLRAR AANAGKNPVWTSYEKLRVVIEKKMFSNTEELLPVISFNAKGSAEEQRKHEDFVNRMVAKGYTPKQVRLLCDWYLRVRKSS
Sequences:
>Translated_640_residues MDIYSSFANRFEKTREEELSLEEYLALCKNDPSAYATAGERMLAAIGEPEQVDTRNEPRLSRIFANKVIKVYPAFREFYG MEEVIEQVVAYFRHAAQGLEEKKQILYLLGPVGGGKSSIAERLKQLMERVPFYALKGSPVNESPLGLFDYDEDGPILEEQ YGIPRRYLKSILSPWAVKRLHEYNGDIRQFRVVRRYPSILRQVGIAKTEPGDENNQDISSLVGKVDIRKLEQYAQDDADA YSYSGGLCLANQGLLEFVEMFKAPIKVLHPLLTATQEGNFKGTEGFGAIPFDGVILAHSNESEWKAFRNNRNNEALLDRI FVVKVPYCLRVSEETKIYEKLIRNSSLAEAVCAPGTLKMMSQFSVLSRLHEPENSSLFSKMQVYDGENLKDTDPKAKSYQ EYRDYAGVDEGMTGVSTRFAFKILSRVFNFDSSEVAANPVHLMYVLEQQIEREQFPPETEQKYLSFVKDVLASRYADFIG KEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEFRDHDTGESFDRAALNAELEKIEKPAGISNPKDYRNEIVNFVLRAR AANAGKNPVWTSYEKLRVVIEKKMFSNTEELLPVISFNAKGSAEEQRKHEDFVNRMVAKGYTPKQVRLLCDWYLRVRKSS >Mature_640_residues MDIYSSFANRFEKTREEELSLEEYLALCKNDPSAYATAGERMLAAIGEPEQVDTRNEPRLSRIFANKVIKVYPAFREFYG MEEVIEQVVAYFRHAAQGLEEKKQILYLLGPVGGGKSSIAERLKQLMERVPFYALKGSPVNESPLGLFDYDEDGPILEEQ YGIPRRYLKSILSPWAVKRLHEYNGDIRQFRVVRRYPSILRQVGIAKTEPGDENNQDISSLVGKVDIRKLEQYAQDDADA YSYSGGLCLANQGLLEFVEMFKAPIKVLHPLLTATQEGNFKGTEGFGAIPFDGVILAHSNESEWKAFRNNRNNEALLDRI FVVKVPYCLRVSEETKIYEKLIRNSSLAEAVCAPGTLKMMSQFSVLSRLHEPENSSLFSKMQVYDGENLKDTDPKAKSYQ EYRDYAGVDEGMTGVSTRFAFKILSRVFNFDSSEVAANPVHLMYVLEQQIEREQFPPETEQKYLSFVKDVLASRYADFIG KEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEFRDHDTGESFDRAALNAELEKIEKPAGISNPKDYRNEIVNFVLRAR AANAGKNPVWTSYEKLRVVIEKKMFSNTEELLPVISFNAKGSAEEQRKHEDFVNRMVAKGYTPKQVRLLCDWYLRVRKSS
Specific function: Unknown
COG id: COG2766
COG function: function code T; Putative Ser protein kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prkA family [H]
Homologues:
Organism=Escherichia coli, GI1788083, Length=644, Percent_Identity=75.1552795031056, Blast_Score=1030, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013153 - InterPro: IPR010650 - InterPro: IPR016230 [H]
Pfam domain/function: PF08298 AAA_PrkA; PF06798 PrkA [H]
EC number: NA
Molecular weight: Translated: 73401; Mature: 73401
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIYSSFANRFEKTREEELSLEEYLALCKNDPSAYATAGERMLAAIGEPEQVDTRNEPRL CCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHCCCCCCHHH SRIFANKVIKVYPAFREFYGMEEVIEQVVAYFRHAAQGLEEKKQILYLLGPVGGGKSSIA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHH ERLKQLMERVPFYALKGSPVNESPLGLFDYDEDGPILEEQYGIPRRYLKSILSPWAVKRL HHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHCHHHHHHH HEYNGDIRQFRVVRRYPSILRQVGIAKTEPGDENNQDISSLVGKVDIRKLEQYAQDDADA HHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH YSYSGGLCLANQGLLEFVEMFKAPIKVLHPLLTATQEGNFKGTEGFGAIPFDGVILAHSN HCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCC ESEWKAFRNNRNNEALLDRIFVVKVPYCLRVSEETKIYEKLIRNSSLAEAVCAPGTLKMM CHHHHHHHCCCCCHHHHHHHHHHCCCHHEECCHHHHHHHHHHCCCHHHHHHHCCHHHHHH SQFSVLSRLHEPENSSLFSKMQVYDGENLKDTDPKAKSYQEYRDYAGVDEGMTGVSTRFA HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH FKILSRVFNFDSSEVAANPVHLMYVLEQQIEREQFPPETEQKYLSFVKDVLASRYADFIG HHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH KEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEFRDHDTGESFDRAALNAELEKIEKPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCC GISNPKDYRNEIVNFVLRARAANAGKNPVWTSYEKLRVVIEKKMFSNTEELLPVISFNAK CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCC GSAEEQRKHEDFVNRMVAKGYTPKQVRLLCDWYLRVRKSS CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDIYSSFANRFEKTREEELSLEEYLALCKNDPSAYATAGERMLAAIGEPEQVDTRNEPRL CCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHCCCCCCHHH SRIFANKVIKVYPAFREFYGMEEVIEQVVAYFRHAAQGLEEKKQILYLLGPVGGGKSSIA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHH ERLKQLMERVPFYALKGSPVNESPLGLFDYDEDGPILEEQYGIPRRYLKSILSPWAVKRL HHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHCHHHHHHH HEYNGDIRQFRVVRRYPSILRQVGIAKTEPGDENNQDISSLVGKVDIRKLEQYAQDDADA HHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH YSYSGGLCLANQGLLEFVEMFKAPIKVLHPLLTATQEGNFKGTEGFGAIPFDGVILAHSN HCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCC ESEWKAFRNNRNNEALLDRIFVVKVPYCLRVSEETKIYEKLIRNSSLAEAVCAPGTLKMM CHHHHHHHCCCCCHHHHHHHHHHCCCHHEECCHHHHHHHHHHCCCHHHHHHHCCHHHHHH SQFSVLSRLHEPENSSLFSKMQVYDGENLKDTDPKAKSYQEYRDYAGVDEGMTGVSTRFA HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH FKILSRVFNFDSSEVAANPVHLMYVLEQQIEREQFPPETEQKYLSFVKDVLASRYADFIG HHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH KEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEFRDHDTGESFDRAALNAELEKIEKPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCC GISNPKDYRNEIVNFVLRARAANAGKNPVWTSYEKLRVVIEKKMFSNTEELLPVISFNAK CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCC GSAEEQRKHEDFVNRMVAKGYTPKQVRLLCDWYLRVRKSS CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]