Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351562

Identifier: 115351562

GI number: 115351562

Start: 1654264

End: 1654593

Strand: Direct

Name: 115351562

Synonym: Bamb_1509

Alternate gene names: NA

Gene position: 1654264-1654593 (Clockwise)

Preceding gene: 115351561

Following gene: 115351563

Centisome position: 46.51

GC content: 54.85

Gene sequence:

>330_bases
GTGACAGCGCGTATGAACGTTCGCACAACGTCGCGTGTCGCATGCGCGCATCGGCGCTACGGGTATCTCCGGACGATGCG
AAAAAAATTTGTAACGGTGCTCGGCGCGTGTCGTCGTAAACGTGCGCTCGAACGTCTAGTGATGAAGGGGAGTGAAGGGC
GCGGTGACGACGGAGATGTCCAACGCGTGAGACGTTCCGATGCTGGACGAGACGCCGCGGATGCAGTTTCTGCGGCACGG
GAGATCAATTGTAAAGCGTCAAAATGCGTTGTCCAAGCGGTGTTGTGGAGAATGACCCACTTCATACGAAGAGTTCGTGA
AAAAAAATAA

Upstream 100 bases:

>100_bases
CGCCTCTATTCCTAGCGCATCTTTCCCTCGCATCTTTCCCTATTTGGCAGCACACGACGCCCGCTACTGCGGGCGTCGTC
GTTTCGGCCACCGATCGAAT

Downstream 100 bases:

>100_bases
GAAAGGGTTTAGGATGAATTCGAACGCGCTTGCTTCTGCGCAGTCATACGAAGGCAAGCACGTCTTCAGACTCAGGCGAG
GGAGGTAGCATGGATATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MTARMNVRTTSRVACAHRRYGYLRTMRKKFVTVLGACRRKRALERLVMKGSEGRGDDGDVQRVRRSDAGRDAADAVSAAR
EINCKASKCVVQAVLWRMTHFIRRVREKK

Sequences:

>Translated_109_residues
MTARMNVRTTSRVACAHRRYGYLRTMRKKFVTVLGACRRKRALERLVMKGSEGRGDDGDVQRVRRSDAGRDAADAVSAAR
EINCKASKCVVQAVLWRMTHFIRRVREKK
>Mature_108_residues
TARMNVRTTSRVACAHRRYGYLRTMRKKFVTVLGACRRKRALERLVMKGSEGRGDDGDVQRVRRSDAGRDAADAVSAARE
INCKASKCVVQAVLWRMTHFIRRVREKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12512; Mature: 12381

Theoretical pI: Translated: 11.94; Mature: 11.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARMNVRTTSRVACAHRRYGYLRTMRKKFVTVLGACRRKRALERLVMKGSEGRGDDGDV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
QRVRRSDAGRDAADAVSAAREINCKASKCVVQAVLWRMTHFIRRVREKK
HHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TARMNVRTTSRVACAHRRYGYLRTMRKKFVTVLGACRRKRALERLVMKGSEGRGDDGDV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
QRVRRSDAGRDAADAVSAAREINCKASKCVVQAVLWRMTHFIRRVREKK
HHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA