| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351562
Identifier: 115351562
GI number: 115351562
Start: 1654264
End: 1654593
Strand: Direct
Name: 115351562
Synonym: Bamb_1509
Alternate gene names: NA
Gene position: 1654264-1654593 (Clockwise)
Preceding gene: 115351561
Following gene: 115351563
Centisome position: 46.51
GC content: 54.85
Gene sequence:
>330_bases GTGACAGCGCGTATGAACGTTCGCACAACGTCGCGTGTCGCATGCGCGCATCGGCGCTACGGGTATCTCCGGACGATGCG AAAAAAATTTGTAACGGTGCTCGGCGCGTGTCGTCGTAAACGTGCGCTCGAACGTCTAGTGATGAAGGGGAGTGAAGGGC GCGGTGACGACGGAGATGTCCAACGCGTGAGACGTTCCGATGCTGGACGAGACGCCGCGGATGCAGTTTCTGCGGCACGG GAGATCAATTGTAAAGCGTCAAAATGCGTTGTCCAAGCGGTGTTGTGGAGAATGACCCACTTCATACGAAGAGTTCGTGA AAAAAAATAA
Upstream 100 bases:
>100_bases CGCCTCTATTCCTAGCGCATCTTTCCCTCGCATCTTTCCCTATTTGGCAGCACACGACGCCCGCTACTGCGGGCGTCGTC GTTTCGGCCACCGATCGAAT
Downstream 100 bases:
>100_bases GAAAGGGTTTAGGATGAATTCGAACGCGCTTGCTTCTGCGCAGTCATACGAAGGCAAGCACGTCTTCAGACTCAGGCGAG GGAGGTAGCATGGATATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MTARMNVRTTSRVACAHRRYGYLRTMRKKFVTVLGACRRKRALERLVMKGSEGRGDDGDVQRVRRSDAGRDAADAVSAAR EINCKASKCVVQAVLWRMTHFIRRVREKK
Sequences:
>Translated_109_residues MTARMNVRTTSRVACAHRRYGYLRTMRKKFVTVLGACRRKRALERLVMKGSEGRGDDGDVQRVRRSDAGRDAADAVSAAR EINCKASKCVVQAVLWRMTHFIRRVREKK >Mature_108_residues TARMNVRTTSRVACAHRRYGYLRTMRKKFVTVLGACRRKRALERLVMKGSEGRGDDGDVQRVRRSDAGRDAADAVSAARE INCKASKCVVQAVLWRMTHFIRRVREKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12512; Mature: 12381
Theoretical pI: Translated: 11.94; Mature: 11.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARMNVRTTSRVACAHRRYGYLRTMRKKFVTVLGACRRKRALERLVMKGSEGRGDDGDV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH QRVRRSDAGRDAADAVSAAREINCKASKCVVQAVLWRMTHFIRRVREKK HHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TARMNVRTTSRVACAHRRYGYLRTMRKKFVTVLGACRRKRALERLVMKGSEGRGDDGDV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH QRVRRSDAGRDAADAVSAAREINCKASKCVVQAVLWRMTHFIRRVREKK HHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA