Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is yeaH [C]

Identifier: 115351564

GI number: 115351564

Start: 1656731

End: 1657999

Strand: Direct

Name: yeaH [C]

Synonym: Bamb_1511

Alternate gene names: 115351564

Gene position: 1656731-1657999 (Clockwise)

Preceding gene: 115351563

Following gene: 115351565

Centisome position: 46.58

GC content: 62.17

Gene sequence:

>1269_bases
GTGCTTCATCAAATCATCGACCGCAGGCTGGCCGGCAAGAACAAGAGCATCGCCAACCGCGAACGCTTTCTGCGTCGCGT
CAAGAACTACATTCGTCGTGCCGTCTCCGACGCGGTGCGCGACCGTAGCATCAAGGATATCCAGAGCACGCAAAGCATCA
CGATCCCGCGCAAGGACATCGCGGAGCCGAATTTCCGGCACGCGCCGGGCGGGCGTCGTGAATACGTGCACCCGGGCAAC
GAGGACTATGTCCGCGGCGACAAGATTCCGCGTCCGCAGGGCGGCTCGGGCGGCGGCGGCAGTCAGGCGAGCAACGAGGG
CGAAGGGCAGGACGACTTCGTGTTCGAGCTGTCGCGCGACGAATTCATGCAGTACTTCTTCGACGATCTCGAACTGCCGC
GCCTCGTGAAGACGCACCTGCTGACGGTGCCGAGCTGGAAGAACGTGCGCGCGGGCTGGTCGGCGGAAGGCACGCCGAAC
AACATCGACGTCGTGCGCTCGCTGAGAAGCGCGCTCGGCCGGCGCATCGCGCTCGGCTCGCCGCTCGTCAACGAATTGCG
CGAGCTCGAAGCCCAGCTCGAGGTGATGAAGCTCGACCCCGAAGACCGTCGCGCGGACATCGCGACGCTCGAGGCCGAGA
TCCATCACCTGAAGGGGCGCATCTGGCGGATCCCGTTCATCGATCCGTTCGATCTGCGCTACATCAATCGCGTGAAGCAG
CCGCAGCCGTCGAGCCAGGCCGTGATGTTCTGCCTGATGGACGTGTCGGGTTCGATGGACGAGCAGCGCAAGGATCTCGC
GAAGCGCTTCTTCATCCTGTTGTACCTGTTCCTGAAGCGCAACTACGAGCGCATCGAGGTCGTGTTCATCCGTCACCACA
CGCGGGCCGAGGAGGTCGACGAAGACACCTTCTTCCATTCGACCGAAAGCGGCGGCACCGTCGTGTCGAGCGCGCTCGAG
CTGATGCGCAAGGTGATGAACGAGCGCTACTCGCCGAGCGAGTGGAACATCTACGGCGCGCAGGCGTCCGACGGCGACAA
CTGGACCGACGATTCGCCGAAGTGTCGCAAAATCCTGGAAGAGGATATCCTCACGAAGACGCGCTATTTTGCGTATATCC
AGGTTGCCCCGGAAGAGCAGAACCTGTGGCTGGAGTACGCGCAGCTGGCGCTGTCGCAACCGCACCTCGCGATGAAGAAA
GCCGAATCGGCTGCCGACATTTACCCGGTGTTTCGCGAATTGTTCGAAAAGCAGGTGGAAATGTCATGA

Upstream 100 bases:

>100_bases
TTCGTCCGCGCGGGCGCCCTCAGAGACGCCGCCCGCATGACGGCAGACGGCATGTGCGGCGAGCGTCCCGGCATATCGAC
TTTCGAGCGGGAGACCGGGA

Downstream 100 bases:

>100_bases
CGACCCGCCATCTGCACAACGAGTCGCGCGGCTACGCGCCGCGCCCTTCCGGCGACGCCACGGCCGGCCCTGCCGCATCG
CAGCAAAGCGGCCGGGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDIAEPNFRHAPGGRREYVHPGN
EDYVRGDKIPRPQGGSGGGGSQASNEGEGQDDFVFELSRDEFMQYFFDDLELPRLVKTHLLTVPSWKNVRAGWSAEGTPN
NIDVVRSLRSALGRRIALGSPLVNELRELEAQLEVMKLDPEDRRADIATLEAEIHHLKGRIWRIPFIDPFDLRYINRVKQ
PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVDEDTFFHSTESGGTVVSSALE
LMRKVMNERYSPSEWNIYGAQASDGDNWTDDSPKCRKILEEDILTKTRYFAYIQVAPEEQNLWLEYAQLALSQPHLAMKK
AESAADIYPVFRELFEKQVEMS

Sequences:

>Translated_422_residues
MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDIAEPNFRHAPGGRREYVHPGN
EDYVRGDKIPRPQGGSGGGGSQASNEGEGQDDFVFELSRDEFMQYFFDDLELPRLVKTHLLTVPSWKNVRAGWSAEGTPN
NIDVVRSLRSALGRRIALGSPLVNELRELEAQLEVMKLDPEDRRADIATLEAEIHHLKGRIWRIPFIDPFDLRYINRVKQ
PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVDEDTFFHSTESGGTVVSSALE
LMRKVMNERYSPSEWNIYGAQASDGDNWTDDSPKCRKILEEDILTKTRYFAYIQVAPEEQNLWLEYAQLALSQPHLAMKK
AESAADIYPVFRELFEKQVEMS
>Mature_422_residues
MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDIAEPNFRHAPGGRREYVHPGN
EDYVRGDKIPRPQGGSGGGGSQASNEGEGQDDFVFELSRDEFMQYFFDDLELPRLVKTHLLTVPSWKNVRAGWSAEGTPN
NIDVVRSLRSALGRRIALGSPLVNELRELEAQLEVMKLDPEDRRADIATLEAEIHHLKGRIWRIPFIDPFDLRYINRVKQ
PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVDEDTFFHSTESGGTVVSSALE
LMRKVMNERYSPSEWNIYGAQASDGDNWTDDSPKCRKILEEDILTKTRYFAYIQVAPEEQNLWLEYAQLALSQPHLAMKK
AESAADIYPVFRELFEKQVEMS

Specific function: Unknown

COG id: COG2718

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0229 family [H]

Homologues:

Organism=Escherichia coli, GI1788084, Length=418, Percent_Identity=52.8708133971292, Blast_Score=438, Evalue=1e-124,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006698 [H]

Pfam domain/function: PF04285 DUF444 [H]

EC number: NA

Molecular weight: Translated: 48806; Mature: 48806

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDI
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHC
AEPNFRHAPGGRREYVHPGNEDYVRGDKIPRPQGGSGGGGSQASNEGEGQDDFVFELSRD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHH
EFMQYFFDDLELPRLVKTHLLTVPSWKNVRAGWSAEGTPNNIDVVRSLRSALGRRIALGS
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEECCCC
PLVNELRELEAQLEVMKLDPEDRRADIATLEAEIHHLKGRIWRIPFIDPFDLRYINRVKQ
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCC
PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVD
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHCC
EDTFFHSTESGGTVVSSALELMRKVMNERYSPSEWNIYGAQASDGDNWTDDSPKCRKILE
CHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHH
EDILTKTRYFAYIQVAPEEQNLWLEYAQLALSQPHLAMKKAESAADIYPVFRELFEKQVE
HHHHHHHEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
MS
CC
>Mature Secondary Structure
MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDI
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHC
AEPNFRHAPGGRREYVHPGNEDYVRGDKIPRPQGGSGGGGSQASNEGEGQDDFVFELSRD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHH
EFMQYFFDDLELPRLVKTHLLTVPSWKNVRAGWSAEGTPNNIDVVRSLRSALGRRIALGS
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEECCCC
PLVNELRELEAQLEVMKLDPEDRRADIATLEAEIHHLKGRIWRIPFIDPFDLRYINRVKQ
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCC
PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVD
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHCC
EDTFFHSTESGGTVVSSALELMRKVMNERYSPSEWNIYGAQASDGDNWTDDSPKCRKILE
CHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHH
EDILTKTRYFAYIQVAPEEQNLWLEYAQLALSQPHLAMKKAESAADIYPVFRELFEKQVE
HHHHHHHEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
MS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA