| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351492
Identifier: 115351492
GI number: 115351492
Start: 1590767
End: 1591249
Strand: Direct
Name: 115351492
Synonym: Bamb_1439
Alternate gene names: NA
Gene position: 1590767-1591249 (Clockwise)
Preceding gene: 115351491
Following gene: 115351493
Centisome position: 44.73
GC content: 67.29
Gene sequence:
>483_bases GTGAACGGGCGTCGACGCGCACGCGGCTTCACGCTGATCGAACTGATGGTGGCGATGTCGCTGCTCGCGTTGCTCGCGAC CGTCGCGCTGCCGTTGACCGATCTCGTCAAACGGCGCTCGGACGAGGCCGAGTTGCGCCGCGTGCTGGTGGTGATCCGCT CGGCGCTCGACGCGTACAAGGCGGCGGCGGATGACGGGCGGATCGAGCGCAGCGTCGACGCGAGCGGTTATCCGCCCGAC CTGCGCGCGCTCGTCGACGGCGTCGAGGACAAGAAGTCGCCCGACGGCGCGCGGCTGTATTTCCTGCGCAAGCTTCCGGC CGATCCGATGTGCGAATGCGACGACAAGGTGCCGGAAGACACCTGGGAAACGCGCAGCTACGCGAGCGACCCCGATTCGT TCTCGTCCGGCGAGGACGTGTTCGACATCCGCTCGACCAACCGCAAGGAGGGCCTCAATGGCGTCCCGTACAACCAGTGG TAG
Upstream 100 bases:
>100_bases CGCTGCAGGCGTTCGTCGATCACGTCGTGGGCGAACGCGAACCGGCGCTGCCGCTGTATGCCGACGCGCCGATGCTGCTG TCGCGCGCGCGGGGCTTCGC
Downstream 100 bases:
>100_bases ACGCGCGCGCCGCGCGGCCGGCTTCACGCTGATCGAGCTGCTCGTGGTGATGGCGATCATCGCGGCGCTCACCGCGTTCG TCGCACCCGGCTACCTGAAG
Product: general secretion pathway GspG related transmembrane protein
Products: NA
Alternate protein names: N-Terminal Methylation Site; Protein Involved In Methylation; Secretion Type II Protein; Type II Secretory Pathway Pseudopilin PulG; General Secretion Pathway Transmembrane Protein; Methylation; GSPG-Like Signal Peptide Protein; G Protein Signal Peptide-Like Secretion Type II Protein; N-Terminal Methylation; Type II Secretion System Transmembrane Protein; Type II Secretion System Protein; Type II Secretion System Pseudopilin PulG; Secretion Protein
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MNGRRRARGFTLIELMVAMSLLALLATVALPLTDLVKRRSDEAELRRVLVVIRSALDAYKAAADDGRIERSVDASGYPPD LRALVDGVEDKKSPDGARLYFLRKLPADPMCECDDKVPEDTWETRSYASDPDSFSSGEDVFDIRSTNRKEGLNGVPYNQW
Sequences:
>Translated_160_residues MNGRRRARGFTLIELMVAMSLLALLATVALPLTDLVKRRSDEAELRRVLVVIRSALDAYKAAADDGRIERSVDASGYPPD LRALVDGVEDKKSPDGARLYFLRKLPADPMCECDDKVPEDTWETRSYASDPDSFSSGEDVFDIRSTNRKEGLNGVPYNQW >Mature_160_residues MNGRRRARGFTLIELMVAMSLLALLATVALPLTDLVKRRSDEAELRRVLVVIRSALDAYKAAADDGRIERSVDASGYPPD LRALVDGVEDKKSPDGARLYFLRKLPADPMCECDDKVPEDTWETRSYASDPDSFSSGEDVFDIRSTNRKEGLNGVPYNQW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17881; Mature: 17881
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGRRRARGFTLIELMVAMSLLALLATVALPLTDLVKRRSDEAELRRVLVVIRSALDAYK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AAADDGRIERSVDASGYPPDLRALVDGVEDKKSPDGARLYFLRKLPADPMCECDDKVPED HHCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCC TWETRSYASDPDSFSSGEDVFDIRSTNRKEGLNGVPYNQW HHHHHCCCCCCCCCCCCCCEEHHHCCCHHCCCCCCCCCCC >Mature Secondary Structure MNGRRRARGFTLIELMVAMSLLALLATVALPLTDLVKRRSDEAELRRVLVVIRSALDAYK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AAADDGRIERSVDASGYPPDLRALVDGVEDKKSPDGARLYFLRKLPADPMCECDDKVPED HHCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCC TWETRSYASDPDSFSSGEDVFDIRSTNRKEGLNGVPYNQW HHHHHCCCCCCCCCCCCCCEEHHHCCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA