| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351493
Identifier: 115351493
GI number: 115351493
Start: 1591224
End: 1591619
Strand: Direct
Name: 115351493
Synonym: Bamb_1440
Alternate gene names: NA
Gene position: 1591224-1591619 (Clockwise)
Preceding gene: 115351492
Following gene: 115351494
Centisome position: 44.74
GC content: 68.18
Gene sequence:
>396_bases ATGGCGTCCCGTACAACCAGTGGTAGACGCGCGCGCCGCGCGGCCGGCTTCACGCTGATCGAGCTGCTCGTGGTGATGGC GATCATCGCGGCGCTCACCGCGTTCGTCGCACCCGGCTACCTGAAGCAGAGCGATCGCGCGAAGGAAACGGTGCTGCGTC ACAACCTGAACACGCTACGCCAGTCGATCGACGATTACCGGGCGGATCACGGCCGCGATCCCGACACGCTCGATGCGCTG GTCGAGAAGCGCTATCTGCGCGAGCTGCCGCTCGACCCGCTCACGGGCAAGCGCGGGTCGTGGCAACCGCAGGCCGGCGA GACGGGCGGCATCGCCGACGTGAAGAGCGGCGCGAAAGGGCGCGCGCTCGACGGGAGCACCTATGCGACGTGGTAA
Upstream 100 bases:
>100_bases GACACCTGGGAAACGCGCAGCTACGCGAGCGACCCCGATTCGTTCTCGTCCGGCGAGGACGTGTTCGACATCCGCTCGAC CAACCGCAAGGAGGGCCTCA
Downstream 100 bases:
>100_bases TCGGCGCCGCGCCGGGCTGCGGCGGGGGCTGCGCGCGCAGCGCGGTATTGCGTATCTCGGCGTGCTGCTGCTCGTCGCGG CGCTGGGGCTCGGCATGACG
Product: type II secretion system protein G
Products: NA
Alternate protein names: General Secretion Pathway Protein G; Secretion Protein; Methylation; Pilus Assembly Protein; General Secretion Pathway GSPG-Like Transmembrane Protein; General Secretion Pathway GSPG-Like; GSPG-Related Protein; N-Terminal Methylation Site; N-Terminal Methylation; Type II Secretion System Pseudopilin OxpG; Pilin Domain-Containing Protein; Type II Secretion System Protein; General Secretion Pathway Protein; Fimbrial Protein Pilin; Prokaryotic N-Terminal Methylation Site
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MASRTTSGRRARRAAGFTLIELLVVMAIIAALTAFVAPGYLKQSDRAKETVLRHNLNTLRQSIDDYRADHGRDPDTLDAL VEKRYLRELPLDPLTGKRGSWQPQAGETGGIADVKSGAKGRALDGSTYATW
Sequences:
>Translated_131_residues MASRTTSGRRARRAAGFTLIELLVVMAIIAALTAFVAPGYLKQSDRAKETVLRHNLNTLRQSIDDYRADHGRDPDTLDAL VEKRYLRELPLDPLTGKRGSWQPQAGETGGIADVKSGAKGRALDGSTYATW >Mature_130_residues ASRTTSGRRARRAAGFTLIELLVVMAIIAALTAFVAPGYLKQSDRAKETVLRHNLNTLRQSIDDYRADHGRDPDTLDALV EKRYLRELPLDPLTGKRGSWQPQAGETGGIADVKSGAKGRALDGSTYATW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14325; Mature: 14194
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRTTSGRRARRAAGFTLIELLVVMAIIAALTAFVAPGYLKQSDRAKETVLRHNLNTLR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH QSIDDYRADHGRDPDTLDALVEKRYLRELPLDPLTGKRGSWQPQAGETGGIADVKSGAKG HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC RALDGSTYATW CCCCCCCCCCC >Mature Secondary Structure ASRTTSGRRARRAAGFTLIELLVVMAIIAALTAFVAPGYLKQSDRAKETVLRHNLNTLR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH QSIDDYRADHGRDPDTLDALVEKRYLRELPLDPLTGKRGSWQPQAGETGGIADVKSGAKG HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC RALDGSTYATW CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA