| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is xcpT [H]
Identifier: 115351483
GI number: 115351483
Start: 1582198
End: 1582638
Strand: Direct
Name: xcpT [H]
Synonym: Bamb_1430
Alternate gene names: 115351483
Gene position: 1582198-1582638 (Clockwise)
Preceding gene: 115351482
Following gene: 115351484
Centisome position: 44.49
GC content: 64.63
Gene sequence:
>441_bases GTGAAACCGAATTATCGGAAATGGACGAAACGCCGTGGCCAGCAGGGCTTCACGCTGCTGGAGCTGCTGGTCGTGCTGCT GATCATCGCGCTGCTGGCCGGCTATGTCGGTCCGAAGCTGTTCTCGCAGGTCGACAAGGCAAAGGTCAAGTCGACGCAAG CGCAGATGAAGACGCTGGGCGATGCGGTCACGCAATTCCGGCTCGATACGGGCAATTACCCGACCGCCGACGAAGGACTC GATGCGCTGGTCGTGCAGCCGCAAGGCGCCGACGGCTGGAACGGTCCGTATCTCGCGAAGGCCGTGCCGAAGGACGGCTG GGGCCGCGCGTACCAATGGAATGTGCCGGGCCGTGATGGCGAGGCGGAGATCGTGTCGCTCGGGCGAGACGGTCGGGTCG GCGGGAGCGGCGTCGATGCGGACCTCGTCTACGGCATGTAA
Upstream 100 bases:
>100_bases ATCGAATCCGCATCCCCGAAAGCGCCTCATTCACCTGCCGTCTGCAACACGACGGCCCCCGGCCGCGACGCCGCCGGGAT CTCTACAGAGGGCAAACGAC
Downstream 100 bases:
>100_bases GGGCCTGCGTCGCTGGATCGCGGCCGTGGCGCTGTTCGCCACCTGCGCATCCGGCGCCGTGGCCAAGGACTGCTGGACCC GGGCGGGAGAGCGGCATGGC
Product: general secretion pathway protein G
Products: NA
Alternate protein names: PilD-dependent protein pddA [H]
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MKPNYRKWTKRRGQQGFTLLELLVVLLIIALLAGYVGPKLFSQVDKAKVKSTQAQMKTLGDAVTQFRLDTGNYPTADEGL DALVVQPQGADGWNGPYLAKAVPKDGWGRAYQWNVPGRDGEAEIVSLGRDGRVGGSGVDADLVYGM
Sequences:
>Translated_146_residues MKPNYRKWTKRRGQQGFTLLELLVVLLIIALLAGYVGPKLFSQVDKAKVKSTQAQMKTLGDAVTQFRLDTGNYPTADEGL DALVVQPQGADGWNGPYLAKAVPKDGWGRAYQWNVPGRDGEAEIVSLGRDGRVGGSGVDADLVYGM >Mature_146_residues MKPNYRKWTKRRGQQGFTLLELLVVLLIIALLAGYVGPKLFSQVDKAKVKSTQAQMKTLGDAVTQFRLDTGNYPTADEGL DALVVQPQGADGWNGPYLAKAVPKDGWGRAYQWNVPGRDGEAEIVSLGRDGRVGGSGVDADLVYGM
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP G family [H]
Homologues:
Organism=Escherichia coli, GI1789725, Length=124, Percent_Identity=37.0967741935484, Blast_Score=70, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000983 - InterPro: IPR012902 - InterPro: IPR001120 - InterPro: IPR013545 - InterPro: IPR010054 [H]
Pfam domain/function: PF08334 GSPII_G; PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 15839; Mature: 15839
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPNYRKWTKRRGQQGFTLLELLVVLLIIALLAGYVGPKLFSQVDKAKVKSTQAQMKTLG CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH DAVTQFRLDTGNYPTADEGLDALVVQPQGADGWNGPYLAKAVPKDGWGRAYQWNVPGRDG HHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCEEECCCCCCCC EAEIVSLGRDGRVGGSGVDADLVYGM CCEEEEECCCCCCCCCCCCCEEECCC >Mature Secondary Structure MKPNYRKWTKRRGQQGFTLLELLVVLLIIALLAGYVGPKLFSQVDKAKVKSTQAQMKTLG CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH DAVTQFRLDTGNYPTADEGLDALVVQPQGADGWNGPYLAKAVPKDGWGRAYQWNVPGRDG HHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCEEECCCCCCCC EAEIVSLGRDGRVGGSGVDADLVYGM CCEEEEECCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1588814; 1309616; 10984043 [H]