Click here to switch to the map view.

The map label for this gene is gbpA [H]

Identifier: 115351482

GI number: 115351482

Start: 1580467

End: 1581927

Strand: Direct

Name: gbpA [H]

Synonym: Bamb_1429

Alternate gene names: 115351482

Gene position: 1580467-1581927 (Clockwise)

Preceding gene: 115351480

Following gene: 115351483

Centisome position: 44.44

GC content: 63.38

Gene sequence:

>1461_bases
ATGAGAACCCGAACAGCGAACAAGACGCTCTTTACCCTGTCGCCGCTCGTGGCCTGCGCGTCGATGTTCTTCGCCCAGGC
CGCATTCGCGCATGGCTACCTGTCGGAGCCGCCGTCGCGCAGTCTGCTGTGCAGCTCGAAAGCGGGCAAGATCGAAAACT
TCAATTGCGGTTCGGTCACCTATGAACCGCAAAGCGTCGAAGGCAAGCAAGGCTTCCCGGCAGCCGGCGCGCCGGACGGC
CAGATCGCGAGCGGCGGCGTGACGCAGTTCAGCGAACTCGACGAGCAGACCGTCGATCGCTGGAAGATCACCGACATCAA
GCCGGGCGCCCAGAAATTCAAGTGGACGTTCACCGCGCCGCACGTGACGAAGGAATTCAAGTATTACCTGACGAAGCAGG
GCTGGAACCCGAACGCGAAGCTCACGCGTGAGCAGTTCGACCTGACGCCGTTCTGCACGATCGACGGCGGGATGAAGAAA
GCCGACGAGATCGGCCCGCACAACTGCACGATTCCGTCGGACAAGAAGGGCCATCACGTGATGCTGACGACGTGGCACGT
CGGCGACACGGCCGGCATGTTCTACAACGTCGCCGACCTGAACATCACCGACGACGGCGGCGCGACCGATCCGGGCAAGC
CGAGCTGGTCGAATGTCGGCAGCATCGCGCCGACGATGGACCTGAAGGTCGGTGACAAGGTCATGAACCGCGTGTTCAAG
TCGGGCGGCGAAGTGCCGTCGATGAAGACGACGGTGACGATCGGCTCCGCGCAGCAAGGCGAACGCAACATGTGGCCGAT
GCTGCTCGCGAAGGAAATCAACCGCACGCAGGCGGCGAACCTGATCGCCGGCGTCGAGCGCGACGGCCGCATCGAGCCGT
CGCTCGGCAAGAACGACGTGTTCTCGAAGAGCACCAGCGGCATCGTGCGCACCGAGACGACGATCGATCACCAGCCGGAA
GGCGGCATCGACGAAGGCTTCAGCATCTCGAACAACGGTGAATTCAAGATCCAGAACGGCAAGGCGACCGCGAAGTTCTT
CCTGAAGTTCAACCACGCGAAGGACACGAACGTCACCGTCAAGGTTTACGACGCGTCGAACTCGCTGGTCGGATCGAAGT
CGTCGACGATGCGCATGCAGGGCGACGTGAACGTCGACATCGCGAACGCGAAGGCGGGTAACCACACGGCCGTGGCGACG
TCGCAGATCGACGGCGGCACGCTGAAGCAGGAAACCACGACGTTCAAGCTGACCGGCGAATCGGGCGGCGGCGAAGGTGC
GCAATGCCAGGCCGAATGGAAGCAGGGCACGGCGTATACGGGCGGCGCGAAGGTGCAGCACAACGGCCGCACGTTCGAAG
CGCGCTGGTGGACGCAGAACGAGGCGCCGGGCGATCCGGCGTCGACCGGCGCCGACCATACCGGCAAGGTGTGGAAGGAG
CTGGGCGCCTGCAGCAAGTAA

Upstream 100 bases:

>100_bases
GCGTTTCGTTAGCCACACATGCGTCACGCAAATTCCGGCGGTCGCATCGCGATGCGTCGAACGAAAAAGCCACCCTTAAA
CTTTCAACCAACGGAATCAG

Downstream 100 bases:

>100_bases
CGACCTGACAAGGAGATGACGCGAGCCGCACGCAGCAATGCGTGCGGCTCTTTCATTTGCGGCTGGCGCGCGAACCGGCG
GATTGAAGCACGCGTTGATA

Product: N-acetylglucosamine-binding protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MRTRTANKTLFTLSPLVACASMFFAQAAFAHGYLSEPPSRSLLCSSKAGKIENFNCGSVTYEPQSVEGKQGFPAAGAPDG
QIASGGVTQFSELDEQTVDRWKITDIKPGAQKFKWTFTAPHVTKEFKYYLTKQGWNPNAKLTREQFDLTPFCTIDGGMKK
ADEIGPHNCTIPSDKKGHHVMLTTWHVGDTAGMFYNVADLNITDDGGATDPGKPSWSNVGSIAPTMDLKVGDKVMNRVFK
SGGEVPSMKTTVTIGSAQQGERNMWPMLLAKEINRTQAANLIAGVERDGRIEPSLGKNDVFSKSTSGIVRTETTIDHQPE
GGIDEGFSISNNGEFKIQNGKATAKFFLKFNHAKDTNVTVKVYDASNSLVGSKSSTMRMQGDVNVDIANAKAGNHTAVAT
SQIDGGTLKQETTTFKLTGESGGGEGAQCQAEWKQGTAYTGGAKVQHNGRTFEARWWTQNEAPGDPASTGADHTGKVWKE
LGACSK

Sequences:

>Translated_486_residues
MRTRTANKTLFTLSPLVACASMFFAQAAFAHGYLSEPPSRSLLCSSKAGKIENFNCGSVTYEPQSVEGKQGFPAAGAPDG
QIASGGVTQFSELDEQTVDRWKITDIKPGAQKFKWTFTAPHVTKEFKYYLTKQGWNPNAKLTREQFDLTPFCTIDGGMKK
ADEIGPHNCTIPSDKKGHHVMLTTWHVGDTAGMFYNVADLNITDDGGATDPGKPSWSNVGSIAPTMDLKVGDKVMNRVFK
SGGEVPSMKTTVTIGSAQQGERNMWPMLLAKEINRTQAANLIAGVERDGRIEPSLGKNDVFSKSTSGIVRTETTIDHQPE
GGIDEGFSISNNGEFKIQNGKATAKFFLKFNHAKDTNVTVKVYDASNSLVGSKSSTMRMQGDVNVDIANAKAGNHTAVAT
SQIDGGTLKQETTTFKLTGESGGGEGAQCQAEWKQGTAYTGGAKVQHNGRTFEARWWTQNEAPGDPASTGADHTGKVWKE
LGACSK
>Mature_486_residues
MRTRTANKTLFTLSPLVACASMFFAQAAFAHGYLSEPPSRSLLCSSKAGKIENFNCGSVTYEPQSVEGKQGFPAAGAPDG
QIASGGVTQFSELDEQTVDRWKITDIKPGAQKFKWTFTAPHVTKEFKYYLTKQGWNPNAKLTREQFDLTPFCTIDGGMKK
ADEIGPHNCTIPSDKKGHHVMLTTWHVGDTAGMFYNVADLNITDDGGATDPGKPSWSNVGSIAPTMDLKVGDKVMNRVFK
SGGEVPSMKTTVTIGSAQQGERNMWPMLLAKEINRTQAANLIAGVERDGRIEPSLGKNDVFSKSTSGIVRTETTIDHQPE
GGIDEGFSISNNGEFKIQNGKATAKFFLKFNHAKDTNVTVKVYDASNSLVGSKSSTMRMQGDVNVDIANAKAGNHTAVAT
SQIDGGTLKQETTTFKLTGESGGGEGAQCQAEWKQGTAYTGGAKVQHNGRTFEARWWTQNEAPGDPASTGADHTGKVWKE
LGACSK

Specific function: Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin [H]

COG id: COG3397

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chitin-binding type-4 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004302
- InterPro:   IPR020879
- InterPro:   IPR014756 [H]

Pfam domain/function: PF03067 Chitin_bind_3 [H]

EC number: NA

Molecular weight: Translated: 52317; Mature: 52317

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRTANKTLFTLSPLVACASMFFAQAAFAHGYLSEPPSRSLLCSSKAGKIENFNCGSVT
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCEE
YEPQSVEGKQGFPAAGAPDGQIASGGVTQFSELDEQTVDRWKITDIKPGAQKFKWTFTAP
ECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCEEEEEEECC
HVTKEFKYYLTKQGWNPNAKLTREQFDLTPFCTIDGGMKKADEIGPHNCTIPSDKKGHHV
CHHHHHEEEEEECCCCCCCCEEHHHCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCEE
MLTTWHVGDTAGMFYNVADLNITDDGGATDPGKPSWSNVGSIAPTMDLKVGDKVMNRVFK
EEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHH
SGGEVPSMKTTVTIGSAQQGERNMWPMLLAKEINRTQAANLIAGVERDGRIEPSLGKNDV
CCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCC
FSKSTSGIVRTETTIDHQPEGGIDEGFSISNNGEFKIQNGKATAKFFLKFNHAKDTNVTV
CCCCCCCEEEEECCCCCCCCCCCCCCCEECCCCCEEEECCCEEEEEEEEECCCCCCEEEE
KVYDASNSLVGSKSSTMRMQGDVNVDIANAKAGNHTAVATSQIDGGTLKQETTTFKLTGE
EEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCCEEEEEECCCCCCEECCCEEEEEECC
SGGGEGAQCQAEWKQGTAYTGGAKVQHNGRTFEARWWTQNEAPGDPASTGADHTGKVWKE
CCCCCCCEEEEHHCCCCEECCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHH
LGACSK
HCCCCC
>Mature Secondary Structure
MRTRTANKTLFTLSPLVACASMFFAQAAFAHGYLSEPPSRSLLCSSKAGKIENFNCGSVT
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCEE
YEPQSVEGKQGFPAAGAPDGQIASGGVTQFSELDEQTVDRWKITDIKPGAQKFKWTFTAP
ECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCEEEEEEECC
HVTKEFKYYLTKQGWNPNAKLTREQFDLTPFCTIDGGMKKADEIGPHNCTIPSDKKGHHV
CHHHHHEEEEEECCCCCCCCEEHHHCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCEE
MLTTWHVGDTAGMFYNVADLNITDDGGATDPGKPSWSNVGSIAPTMDLKVGDKVMNRVFK
EEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHH
SGGEVPSMKTTVTIGSAQQGERNMWPMLLAKEINRTQAANLIAGVERDGRIEPSLGKNDV
CCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCC
FSKSTSGIVRTETTIDHQPEGGIDEGFSISNNGEFKIQNGKATAKFFLKFNHAKDTNVTV
CCCCCCCEEEEECCCCCCCCCCCCCCCEECCCCCEEEECCCEEEEEEEEECCCCCCEEEE
KVYDASNSLVGSKSSTMRMQGDVNVDIANAKAGNHTAVATSQIDGGTLKQETTTFKLTGE
EEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCCEEEEEECCCCCCEECCCEEEEEECC
SGGGEGAQCQAEWKQGTAYTGGAKVQHNGRTFEARWWTQNEAPGDPASTGADHTGKVWKE
CCCCCCCEEEEHHCCCCEECCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHH
LGACSK
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]