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The map label for this gene is iagB [H]

Identifier: 115351484

GI number: 115351484

Start: 1582613

End: 1583125

Strand: Direct

Name: iagB [H]

Synonym: Bamb_1431

Alternate gene names: 115351484

Gene position: 1582613-1583125 (Clockwise)

Preceding gene: 115351483

Following gene: 115351485

Centisome position: 44.5

GC content: 65.69

Gene sequence:

>513_bases
ATGCGGACCTCGTCTACGGCATGTAAGGGCCTGCGTCGCTGGATCGCGGCCGTGGCGCTGTTCGCCACCTGCGCATCCGG
CGCCGTGGCCAAGGACTGCTGGACCCGGGCGGGAGAGCGGCATGGCATCGATCCGCTGCTGCTGGTCGCGATCGCGAAGG
TGGAATCCGCGCTGAATCCGCGCGCGATGAACTGGAACCGGAACGGCACTTACGACATCGGGCTGATGCAGATCAACAGT
TCGCATCTGCCGCGTCTCGTGAAGGTCGGCGTGACGCACAAGCGGCTGATCAACGAACCCTGCACGTCGATCGACACCGG
CGCGTCGATTCTCGCCGGATTCATCGACCGGCACGGCTACACGTGGAACGCGGTCGGCGCGTACAACGCCGGCTCGTCGG
AGAAACGCGTGCCGGCACGCAAGGCTTATGCGACCAAGGTCTGGCGCGAGTACCGCGCATTGACGAGCGATCGCGACGCG
AGCCTCGCGATGCTCGACGAATGGCGGAGGTAG

Upstream 100 bases:

>100_bases
GGCTGGGGCCGCGCGTACCAATGGAATGTGCCGGGCCGTGATGGCGAGGCGGAGATCGTGTCGCTCGGGCGAGACGGTCG
GGTCGGCGGGAGCGGCGTCG

Downstream 100 bases:

>100_bases
CCATGCAGGCATTTCGGGTACGCGTGCTCGCCGACGGCAAGATCGCCCAGCAGACGATCGAAGCCGCGAGCGAGATGGAG
GTGCGCGCACGGCTCGCGGA

Product: lytic transglycosylase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MRTSSTACKGLRRWIAAVALFATCASGAVAKDCWTRAGERHGIDPLLLVAIAKVESALNPRAMNWNRNGTYDIGLMQINS
SHLPRLVKVGVTHKRLINEPCTSIDTGASILAGFIDRHGYTWNAVGAYNAGSSEKRVPARKAYATKVWREYRALTSDRDA
SLAMLDEWRR

Sequences:

>Translated_170_residues
MRTSSTACKGLRRWIAAVALFATCASGAVAKDCWTRAGERHGIDPLLLVAIAKVESALNPRAMNWNRNGTYDIGLMQINS
SHLPRLVKVGVTHKRLINEPCTSIDTGASILAGFIDRHGYTWNAVGAYNAGSSEKRVPARKAYATKVWREYRALTSDRDA
SLAMLDEWRR
>Mature_170_residues
MRTSSTACKGLRRWIAAVALFATCASGAVAKDCWTRAGERHGIDPLLLVAIAKVESALNPRAMNWNRNGTYDIGLMQINS
SHLPRLVKVGVTHKRLINEPCTSIDTGASILAGFIDRHGYTWNAVGAYNAGSSEKRVPARKAYATKVWREYRALTSDRDA
SLAMLDEWRR

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iagB/ipgF/P19 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 18776; Mature: 18776

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTSSTACKGLRRWIAAVALFATCASGAVAKDCWTRAGERHGIDPLLLVAIAKVESALNP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
RAMNWNRNGTYDIGLMQINSSHLPRLVKVGVTHKRLINEPCTSIDTGASILAGFIDRHGY
CCCCCCCCCCEEEEEEEECCCCCCHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
TWNAVGAYNAGSSEKRVPARKAYATKVWREYRALTSDRDASLAMLDEWRR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MRTSSTACKGLRRWIAAVALFATCASGAVAKDCWTRAGERHGIDPLLLVAIAKVESALNP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
RAMNWNRNGTYDIGLMQINSSHLPRLVKVGVTHKRLINEPCTSIDTGASILAGFIDRHGY
CCCCCCCCCCEEEEEEEECCCCCCHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
TWNAVGAYNAGSSEKRVPARKAYATKVWREYRALTSDRDASLAMLDEWRR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7754225; 11677608; 12644504 [H]