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The map label for this gene is 115351294

Identifier: 115351294

GI number: 115351294

Start: 1356034

End: 1356816

Strand: Direct

Name: 115351294

Synonym: Bamb_1241

Alternate gene names: NA

Gene position: 1356034-1356816 (Clockwise)

Preceding gene: 115351291

Following gene: 115351295

Centisome position: 38.13

GC content: 71.65

Gene sequence:

>783_bases
ATGAACCGGAAGATCAAGACGGGCGCCGCGCGCGCCGCGATTACCGGCACGCGGCGGCGCGCGTTGCGCTCGCTCGCGGG
TGCGGCGTTCGCCTTGGGCGCGTGCCTGTCGGCCAGCGCGCCTGCGCTCGCCGCCGATGCAGCGGCGGCGGTTGCGGCGC
CGGCCGTCACGCGCGTCGCGATGCTCGTGCAGCTGCACGGCCCGAACCTGAAGGTCGACGAACGGATCGGCCAGCATCTC
GGCGAGCGCGGCTACGCGGTGCGGCTGATCGACGAGAGCGCGACGCCCGACGCGGCGCGCGATGCCGACCTCGTCGTGAT
CTCGTCGACGGTGTCGTCGAAGAACGTGCGGCCCGGCTGGCGCACGCTCGACAAGCCGCTCGTCACGTGGGAGAACGACC
TGCTCGACGATCTCGCGATGACGGGCAAGCGCCACGACGTCGACTTCGGCGAAACGGGCAAGGAACGCTATCTGTGGCTC
GTCAACGCGCCGCATTCGATCTCGGCCGGCTTGCCGGCCGGCGTGGCCGACGTGTACGGCAAGCAGGCGCCGATGAGCTG
GGGCAGGCCGGGGCTCGGCGCGATCACGATCGCGACCGTGTACGGGCAGCCGGACAAGGCCGCGATTTTCGCGTACGAGA
AGGGGGCGACGATGGACTACGAAGCGCTCGCGCCGGCACGCCGCGTGATGTTCTTCCTCGCCAACGACACGTTCGCGAAC
CTGTCGCCGGCCGGGCTCGCGCTGTTCGACGCGGCGCTCGACTGGGCGGCGGGGCGGCGCTGA

Upstream 100 bases:

>100_bases
CGCGCGATGCGGCCCGAATATGCTATTGCACGTGTCCCACTTGTTTCATGCAATCGCCGCACGTCGCGCATGACGACGCG
CGGCTTCGGAGAAGAACCTG

Downstream 100 bases:

>100_bases
TGCCACGCGGCGCGCCGGCATGTGCCGGGCGGGGCGCGCGCAGCGTCGGCGGCGATCGGCATTGAGTGCGAGAATTCGCC
CTTCGGCCGGCGCGCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Thaumatin Pathogenesis-Related Protein; YD Repeat-Containing Protein; Lipoprotein

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MNRKIKTGAARAAITGTRRRALRSLAGAAFALGACLSASAPALAADAAAAVAAPAVTRVAMLVQLHGPNLKVDERIGQHL
GERGYAVRLIDESATPDAARDADLVVISSTVSSKNVRPGWRTLDKPLVTWENDLLDDLAMTGKRHDVDFGETGKERYLWL
VNAPHSISAGLPAGVADVYGKQAPMSWGRPGLGAITIATVYGQPDKAAIFAYEKGATMDYEALAPARRVMFFLANDTFAN
LSPAGLALFDAALDWAAGRR

Sequences:

>Translated_260_residues
MNRKIKTGAARAAITGTRRRALRSLAGAAFALGACLSASAPALAADAAAAVAAPAVTRVAMLVQLHGPNLKVDERIGQHL
GERGYAVRLIDESATPDAARDADLVVISSTVSSKNVRPGWRTLDKPLVTWENDLLDDLAMTGKRHDVDFGETGKERYLWL
VNAPHSISAGLPAGVADVYGKQAPMSWGRPGLGAITIATVYGQPDKAAIFAYEKGATMDYEALAPARRVMFFLANDTFAN
LSPAGLALFDAALDWAAGRR
>Mature_260_residues
MNRKIKTGAARAAITGTRRRALRSLAGAAFALGACLSASAPALAADAAAAVAAPAVTRVAMLVQLHGPNLKVDERIGQHL
GERGYAVRLIDESATPDAARDADLVVISSTVSSKNVRPGWRTLDKPLVTWENDLLDDLAMTGKRHDVDFGETGKERYLWL
VNAPHSISAGLPAGVADVYGKQAPMSWGRPGLGAITIATVYGQPDKAAIFAYEKGATMDYEALAPARRVMFFLANDTFAN
LSPAGLALFDAALDWAAGRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27468; Mature: 27468

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKIKTGAARAAITGTRRRALRSLAGAAFALGACLSASAPALAADAAAAVAAPAVTRVA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
MLVQLHGPNLKVDERIGQHLGERGYAVRLIDESATPDAARDADLVVISSTVSSKNVRPGW
HHEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCH
RTLDKPLVTWENDLLDDLAMTGKRHDVDFGETGKERYLWLVNAPHSISAGLPAGVADVYG
HHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHC
KQAPMSWGRPGLGAITIATVYGQPDKAAIFAYEKGATMDYEALAPARRVMFFLANDTFAN
CCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHCHHHHEEEEEECCCCCC
LSPAGLALFDAALDWAAGRR
CCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNRKIKTGAARAAITGTRRRALRSLAGAAFALGACLSASAPALAADAAAAVAAPAVTRVA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
MLVQLHGPNLKVDERIGQHLGERGYAVRLIDESATPDAARDADLVVISSTVSSKNVRPGW
HHEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCH
RTLDKPLVTWENDLLDDLAMTGKRHDVDFGETGKERYLWLVNAPHSISAGLPAGVADVYG
HHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHC
KQAPMSWGRPGLGAITIATVYGQPDKAAIFAYEKGATMDYEALAPARRVMFFLANDTFAN
CCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHCHHHHEEEEEECCCCCC
LSPAGLALFDAALDWAAGRR
CCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA