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The map label for this gene is yddH [H]

Identifier: 115351295

GI number: 115351295

Start: 1356938

End: 1357516

Strand: Direct

Name: yddH [H]

Synonym: Bamb_1242

Alternate gene names: 115351295

Gene position: 1356938-1357516 (Clockwise)

Preceding gene: 115351294

Following gene: 115351297

Centisome position: 38.15

GC content: 67.7

Gene sequence:

>579_bases
ATGGACAGTCACATCGCGCCGGTGGCGCTGCAGAAAGCCTACCGTCTCCTCAACCACGGCCCGACCGTGCTCGTGTCGGC
CCGCCACGACGGTGTCGACAACGTGATGGCCGCCGCATGGGCCTGCGCGCTCGATTTCCTGCCGCCGAAGCTGACGGTCG
TGCTCGACAAGTCCGCGAAGACGCGCGAGCTCGTCGAGCGCAGCGGCAGGTTCGTGATCCAGGTGCCGACGGCCGCGCAG
CTACAGCTCACGCATGCGGTCGGCAGCCACAGTCTCGCCGAGCGGCCCGACAAGCTGCGCGACGCGGGCGTCACGCTGTT
CGACGTGCCAGGCCACGACCTGCCGTTCGTCGCCGGCTGCTCCGGCTGGCTCGCGTGCAAGCTGATTCACGAGCCGCACA
ACCAGCAGACCTACGACCTGTTCATCGGCGAGGTGGTCGGCGCGTGGTCCGACACGCGCGTGTTCCGCGACGGTCACTGG
TATTTCGAATCGGCCGATCCGGCGCTGCGCAGCCTGCATTACATCGCGGGCGGCAACTTCTATGCGATCGGCGAATCGCT
GCACGTCGATCCGGGCTAG

Upstream 100 bases:

>100_bases
GTGCCGGGCGGGGCGCGCGCAGCGTCGGCGGCGATCGGCATTGAGTGCGAGAATTCGCCCTTCGGCCGGCGCGCGCCGCG
CCGCTCACCAGGGAACCCGC

Downstream 100 bases:

>100_bases
CCGGACCCACAGTAAGCCGCCGGCCGGCGCTCGGCCGCAGTTCCAGGCGCGCGGCTCACGCACGCTTTTTCAATGCCGCG
AGCATCGCGTCGGCGAACGC

Product: flavin reductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MDSHIAPVALQKAYRLLNHGPTVLVSARHDGVDNVMAAAWACALDFLPPKLTVVLDKSAKTRELVERSGRFVIQVPTAAQ
LQLTHAVGSHSLAERPDKLRDAGVTLFDVPGHDLPFVAGCSGWLACKLIHEPHNQQTYDLFIGEVVGAWSDTRVFRDGHW
YFESADPALRSLHYIAGGNFYAIGESLHVDPG

Sequences:

>Translated_192_residues
MDSHIAPVALQKAYRLLNHGPTVLVSARHDGVDNVMAAAWACALDFLPPKLTVVLDKSAKTRELVERSGRFVIQVPTAAQ
LQLTHAVGSHSLAERPDKLRDAGVTLFDVPGHDLPFVAGCSGWLACKLIHEPHNQQTYDLFIGEVVGAWSDTRVFRDGHW
YFESADPALRSLHYIAGGNFYAIGESLHVDPG
>Mature_192_residues
MDSHIAPVALQKAYRLLNHGPTVLVSARHDGVDNVMAAAWACALDFLPPKLTVVLDKSAKTRELVERSGRFVIQVPTAAQ
LQLTHAVGSHSLAERPDKLRDAGVTLFDVPGHDLPFVAGCSGWLACKLIHEPHNQQTYDLFIGEVVGAWSDTRVFRDGHW
YFESADPALRSLHYIAGGNFYAIGESLHVDPG

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

Organism=Escherichia coli, GI87081916, Length=188, Percent_Identity=40.4255319148936, Blast_Score=138, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 21002; Mature: 21002

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSHIAPVALQKAYRLLNHGPTVLVSARHDGVDNVMAAAWACALDFLPPKLTVVLDKSAK
CCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCH
TRELVERSGRFVIQVPTAAQLQLTHAVGSHSLAERPDKLRDAGVTLFDVPGHDLPFVAGC
HHHHHHHCCCEEEEECCCCEEEEEEHHCCCHHHCCCHHHHHCCCEEEECCCCCCCEEECC
SGWLACKLIHEPHNQQTYDLFIGEVVGAWSDTRVFRDGHWYFESADPALRSLHYIAGGNF
CCEEEEEEEECCCCCEEHHEEHHHHHCCCCCCEEEECCCEEEECCCHHHHHHHHHCCCCE
YAIGESLHVDPG
EEECCEEECCCC
>Mature Secondary Structure
MDSHIAPVALQKAYRLLNHGPTVLVSARHDGVDNVMAAAWACALDFLPPKLTVVLDKSAK
CCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCH
TRELVERSGRFVIQVPTAAQLQLTHAVGSHSLAERPDKLRDAGVTLFDVPGHDLPFVAGC
HHHHHHHCCCEEEEECCCCEEEEEEHHCCCHHHCCCHHHHHCCCEEEECCCCCCCEEECC
SGWLACKLIHEPHNQQTYDLFIGEVVGAWSDTRVFRDGHWYFESADPALRSLHYIAGGNF
CCEEEEEEEECCCCCEEHHEEHHHHHCCCCCCEEEECCCEEEECCCHHHHHHHHHCCCCE
YAIGESLHVDPG
EEECCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]