Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351291

Identifier: 115351291

GI number: 115351291

Start: 1352495

End: 1352749

Strand: Direct

Name: 115351291

Synonym: Bamb_1238

Alternate gene names: NA

Gene position: 1352495-1352749 (Clockwise)

Preceding gene: 115351290

Following gene: 115351294

Centisome position: 38.03

GC content: 70.98

Gene sequence:

>255_bases
ATGAACACGAAGCACCCCAACGCGACCGTCGGCGGCGCGGCGCGAAACACCGCGCCGATGTGCAGCGCAGACGCGGCGCC
GGACGATGCGCTGATCGGCAAGACCGAAGCCGAGGCGACCGCACTGCTCGACGGCTGCCTGTGGCGCGTGCTCGAGCGCG
ACGGCAAGTCGCTGCCGGGCACGATGGACTATCGCGAGGAGCGCCGCGACCTCGGCATTCGCGACGGCAAGGTGATCTGG
GTGCGGCGCGGGTGA

Upstream 100 bases:

>100_bases
ACATGGATCGCCGGGCCGCGACACGGAGAAGCCAGTGAAGAACACGATCGCGATGCTCGTTGCACTCGTTGCGAGCGCAA
CCTTTTCAGGATGTGGGGAC

Downstream 100 bases:

>100_bases
TCGATGAGGCCGGCGGGGCCGGCCGAGTCGCATGCCGTTTGCCGGCCGCGACGGGCGTGCGAACCCGTGCGCGTTACTTC
GAGATATACCAGAGCGCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MNTKHPNATVGGAARNTAPMCSADAAPDDALIGKTEAEATALLDGCLWRVLERDGKSLPGTMDYREERRDLGIRDGKVIW
VRRG

Sequences:

>Translated_84_residues
MNTKHPNATVGGAARNTAPMCSADAAPDDALIGKTEAEATALLDGCLWRVLERDGKSLPGTMDYREERRDLGIRDGKVIW
VRRG
>Mature_84_residues
MNTKHPNATVGGAARNTAPMCSADAAPDDALIGKTEAEATALLDGCLWRVLERDGKSLPGTMDYREERRDLGIRDGKVIW
VRRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9110; Mature: 9110

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKHPNATVGGAARNTAPMCSADAAPDDALIGKTEAEATALLDGCLWRVLERDGKSLPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
TMDYREERRDLGIRDGKVIWVRRG
CCCHHHHHHCCCCCCCCEEEEECC
>Mature Secondary Structure
MNTKHPNATVGGAARNTAPMCSADAAPDDALIGKTEAEATALLDGCLWRVLERDGKSLPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
TMDYREERRDLGIRDGKVIWVRRG
CCCHHHHHHCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA