The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351283

Identifier: 115351283

GI number: 115351283

Start: 1342335

End: 1342724

Strand: Direct

Name: 115351283

Synonym: Bamb_1230

Alternate gene names: NA

Gene position: 1342335-1342724 (Clockwise)

Preceding gene: 115351282

Following gene: 115351284

Centisome position: 37.74

GC content: 65.64

Gene sequence:

>390_bases
TTGCGCCCTGACGGTGCCGAGGCCGGTCCCGCGAAAGCGCTGACGTCCGGCCTGCGCGAGCATGCGCGCAATGCCGAAAC
GCGTGCACTCATCGCGCGTTCTGCAGGTTCGCGGAATCGCCCGAATCACCCCAAATCGCCCGCCGTCCGACGACAAACCG
CGATTCATCTGATAATACGCGCGGCGATCCACGCGAACGAGCAATGGTGCGAATCCCGCCGAACCGTTGCACAGGCAACC
AGGCGGCAGCATCGCCCCGATTGCGTCGTCACCCGTCGCAATCCGGAAAGCGAAACGGCGTCAGGCCCACTTGGTCGTTC
GGAATGTGCCCAGCGCCGTTCAAATCCCCACACGACGCCCGCGCGACGCGGCGTCGCAACCAGGAGGTGA

Upstream 100 bases:

>100_bases
GCGTTGCAAGCGGGCGATCCGATCGCGGCGCAAACCGCGATGCGCGCCCATCTTCAGGCGTCGGAGGAGCGCTGGATCGG
CGGCGCATTGCAGCACGGGA

Downstream 100 bases:

>100_bases
ACGATGATCACGCTGACCGTCAACGGTGGCGAACGGCATTTCGACGGCAATCCCGACATGCCGTTGCTCTGGTATCTGCG
CGATGTCCTCGGCCACACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MRPDGAEAGPAKALTSGLREHARNAETRALIARSAGSRNRPNHPKSPAVRRQTAIHLIIRAAIHANEQWCESRRTVAQAT
RRQHRPDCVVTRRNPESETASGPLGRSECAQRRSNPHTTPARRGVATRR

Sequences:

>Translated_129_residues
MRPDGAEAGPAKALTSGLREHARNAETRALIARSAGSRNRPNHPKSPAVRRQTAIHLIIRAAIHANEQWCESRRTVAQAT
RRQHRPDCVVTRRNPESETASGPLGRSECAQRRSNPHTTPARRGVATRR
>Mature_129_residues
MRPDGAEAGPAKALTSGLREHARNAETRALIARSAGSRNRPNHPKSPAVRRQTAIHLIIRAAIHANEQWCESRRTVAQAT
RRQHRPDCVVTRRNPESETASGPLGRSECAQRRSNPHTTPARRGVATRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14275; Mature: 14275

Theoretical pI: Translated: 12.36; Mature: 12.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPDGAEAGPAKALTSGLREHARNAETRALIARSAGSRNRPNHPKSPAVRRQTAIHLIIR
CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
AAIHANEQWCESRRTVAQATRRQHRPDCVVTRRNPESETASGPLGRSECAQRRSNPHTTP
HHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCH
ARRGVATRR
HHCCCCCCC
>Mature Secondary Structure
MRPDGAEAGPAKALTSGLREHARNAETRALIARSAGSRNRPNHPKSPAVRRQTAIHLIIR
CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
AAIHANEQWCESRRTVAQATRRQHRPDCVVTRRNPESETASGPLGRSECAQRRSNPHTTP
HHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCH
ARRGVATRR
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA