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The map label for this gene is amaB [H]

Identifier: 115351185

GI number: 115351185

Start: 1242422

End: 1243693

Strand: Direct

Name: amaB [H]

Synonym: Bamb_1132

Alternate gene names: 115351185

Gene position: 1242422-1243693 (Clockwise)

Preceding gene: 115351184

Following gene: 115351186

Centisome position: 34.93

GC content: 72.33

Gene sequence:

>1272_bases
ATGAAAGACCTGTTGGAAATCGACGGTGCCCGCCTGTGGCGGAGCCTGGCCGACATGGCGCGCATCGGCGCGACGCCGCG
CGGCGGCGTGCGGCGCCTCGCGCTGACCGACGACGACCGGCGCGGGCGCGACCTGTTCGCGCAGTGGTGTCGCGACGCGG
GGATGACGGTGAGCGTCGACGCGGTCGGCAACCTGTTCGCGCGGCGCGACGGCACCGATGCGCAGGCCGCGCCGGTGCTG
ATCGGCAGCCATCTCGACACGCAGCCCGAAGGCGGGCGCTTCGATGGCGTGTACGGCGTGCTCGCCGGGCTCGAAGTCGT
GCGCACGCTCAACGATGCGGGCATCGTGACCGGCAAGCCGCTCGAGATCGTGTCGTGGACCAACGAGGAGGGCGCGCGTT
TCGCGCCGGCGATGCTCGGCTCGGCCGTGTTCACGGGCGCGCTGCCGCTCGACGACGCGCTCGCGAAGCAGGACGCCGAC
GGCATCACGCTCGGCGCCGCGCTGGACGCATGCGGCTGTCGCGGCACGCGTGCGGCGGGCGGCGCGGTCGACGCGTATTT
CGAAGCGCATATCGAACAGGGGCCCGTGCTCGAGGCGAACGGCACGACGATCGGCATCGTCACGGGCGGGCAGGCGATCC
GCTGGCTCGACGTGCGCGTGACGGGCGTGGCCGCGCACGCGGGCACGACGCCGATGCCGTATCGCAAGGACGCGTATTTC
GCGAGCGCGCAGATGGCGCTCGAACTGGAACGCATCGTCGCCGGCTACGCGCCGCGCGGGCTCGCGACGATCGGGCAGGT
CGGCATCCGCAACGCGTCGCGCAACACGATCGCCGGCGACGTGACGTTCACCGTCGACCTGCGCCATCACGACGACGCGC
AAGTCGATGCGATGGAGCGCGCGCTGCGTGACGCATACGCGCGCGTGGCCGCGGCGCGCGGCGTGCAGGTCGCGATCGAT
ACCTGCTGGCGCAGCCCCGCGACGCCGTTCGACCGCGGCTGCGTCGAGCTGGTCGCGCAGGCGGCGCAGGCATTTGGTTA
TACGAACGAACGGATCGTCAGCGGCGCCGGTCACGATGCGATCGTGCTCGCGCGCCGCGTGCCGACCGCGATGGTGTTCA
TCCCGTGCGTCGACGGGCTGTCGCACAACGAGGCCGAGGACGCGCTGCCCGACGACGTGACGCGCGGCACCAACGTGCTG
CTCAACGCGGTGCTCGCGCGGGCGGGCGTCGCGACGCGCGTGGCTGCAGCGGCAGCCGCGCACGATGCATGA

Upstream 100 bases:

>100_bases
TTGCATCGTCGCGCTCGACGCGCGACGCGCGGGCCGGCCGGCCGCGGCCGAAGCGCTCGGCTCGCACTGACCCTCGACGA
ACGAATTCATCGGAGTGCAA

Downstream 100 bases:

>100_bases
CGCGACGAATCGACGAGGACCGACGATGAAAACCTATTTCCACCCCGAACAGTTGCTGCACCATCCGCGGACCTACCTGT
CGCGCGGCAGGATGCGCGAG

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MKDLLEIDGARLWRSLADMARIGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMTVSVDAVGNLFARRDGTDAQAAPVL
IGSHLDTQPEGGRFDGVYGVLAGLEVVRTLNDAGIVTGKPLEIVSWTNEEGARFAPAMLGSAVFTGALPLDDALAKQDAD
GITLGAALDACGCRGTRAAGGAVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVRVTGVAAHAGTTPMPYRKDAYF
ASAQMALELERIVAGYAPRGLATIGQVGIRNASRNTIAGDVTFTVDLRHHDDAQVDAMERALRDAYARVAAARGVQVAID
TCWRSPATPFDRGCVELVAQAAQAFGYTNERIVSGAGHDAIVLARRVPTAMVFIPCVDGLSHNEAEDALPDDVTRGTNVL
LNAVLARAGVATRVAAAAAAHDA

Sequences:

>Translated_423_residues
MKDLLEIDGARLWRSLADMARIGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMTVSVDAVGNLFARRDGTDAQAAPVL
IGSHLDTQPEGGRFDGVYGVLAGLEVVRTLNDAGIVTGKPLEIVSWTNEEGARFAPAMLGSAVFTGALPLDDALAKQDAD
GITLGAALDACGCRGTRAAGGAVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVRVTGVAAHAGTTPMPYRKDAYF
ASAQMALELERIVAGYAPRGLATIGQVGIRNASRNTIAGDVTFTVDLRHHDDAQVDAMERALRDAYARVAAARGVQVAID
TCWRSPATPFDRGCVELVAQAAQAFGYTNERIVSGAGHDAIVLARRVPTAMVFIPCVDGLSHNEAEDALPDDVTRGTNVL
LNAVLARAGVATRVAAAAAAHDA
>Mature_423_residues
MKDLLEIDGARLWRSLADMARIGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMTVSVDAVGNLFARRDGTDAQAAPVL
IGSHLDTQPEGGRFDGVYGVLAGLEVVRTLNDAGIVTGKPLEIVSWTNEEGARFAPAMLGSAVFTGALPLDDALAKQDAD
GITLGAALDACGCRGTRAAGGAVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVRVTGVAAHAGTTPMPYRKDAYF
ASAQMALELERIVAGYAPRGLATIGQVGIRNASRNTIAGDVTFTVDLRHHDDAQVDAMERALRDAYARVAAARGVQVAID
TCWRSPATPFDRGCVELVAQAAQAFGYTNERIVSGAGHDAIVLARRVPTAMVFIPCVDGLSHNEAEDALPDDVTRGTNVL
LNAVLARAGVATRVAAAAAAHDA

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=390, Percent_Identity=32.3076923076923, Blast_Score=197, Evalue=8e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 44364; Mature: 44364

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLLEIDGARLWRSLADMARIGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMTVSVD
CCCHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEHH
AVGNLFARRDGTDAQAAPVLIGSHLDTQPEGGRFDGVYGVLAGLEVVRTLNDAGIVTGKP
HHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
LEIVSWTNEEGARFAPAMLGSAVFTGALPLDDALAKQDADGITLGAALDACGCRGTRAAG
EEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEHHHHHHCCCCCCCCCC
GAVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVRVTGVAAHAGTTPMPYRKDAYF
CHHHHHHHHHCCCCCEEECCCCEEEEEECCCEEEEEEEEEEEEEECCCCCCCCCCCCCHH
ASAQMALELERIVAGYAPRGLATIGQVGIRNASRNTIAGDVTFTVDLRHHDDAQVDAMER
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEECEEEEEEEECCCCCCHHHHHHH
ALRDAYARVAAARGVQVAIDTCWRSPATPFDRGCVELVAQAAQAFGYTNERIVSGAGHDA
HHHHHHHHHHHHCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCE
IVLARRVPTAMVFIPCVDGLSHNEAEDALPDDVTRGTNVLLNAVLARAGVATRVAAAAAA
EEEEECCCEEEEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
HDA
CCC
>Mature Secondary Structure
MKDLLEIDGARLWRSLADMARIGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMTVSVD
CCCHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEHH
AVGNLFARRDGTDAQAAPVLIGSHLDTQPEGGRFDGVYGVLAGLEVVRTLNDAGIVTGKP
HHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
LEIVSWTNEEGARFAPAMLGSAVFTGALPLDDALAKQDADGITLGAALDACGCRGTRAAG
EEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEHHHHHHCCCCCCCCCC
GAVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVRVTGVAAHAGTTPMPYRKDAYF
CHHHHHHHHHCCCCCEEECCCCEEEEEECCCEEEEEEEEEEEEEECCCCCCCCCCCCCHH
ASAQMALELERIVAGYAPRGLATIGQVGIRNASRNTIAGDVTFTVDLRHHDDAQVDAMER
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEECEEEEEEEECCCCCCHHHHHHH
ALRDAYARVAAARGVQVAIDTCWRSPATPFDRGCVELVAQAAQAFGYTNERIVSGAGHDA
HHHHHHHHHHHHCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCE
IVLARRVPTAMVFIPCVDGLSHNEAEDALPDDVTRGTNVLLNAVLARAGVATRVAAAAAA
EEEEECCCEEEEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
HDA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]