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The map label for this gene is ywnA [H]

Identifier: 115351142

GI number: 115351142

Start: 1189383

End: 1189838

Strand: Direct

Name: ywnA [H]

Synonym: Bamb_1088

Alternate gene names: 115351142

Gene position: 1189383-1189838 (Clockwise)

Preceding gene: 115351141

Following gene: 115351143

Centisome position: 33.44

GC content: 67.98

Gene sequence:

>456_bases
ATGAATACCAGCAGCCGGTTCGCGTTTGCCGTTCACGTGCTTGCCTTGCTGTCGATGCAGGAAGGCGCGCCGCTGTCGTC
CGACATCATCGCGGGCAGCGTGAACACGAATCCGGCGCTGATTCGCCGTCTGCTGTCGATGCTGGCGGCTGCCGGGCTGA
CCACGTCGCAACTCGGCGCGGGCGGCGGCGCGCTGCTGGCGCGCGAGCCGGGCAAGATCACGCTGCTTGACGTGTATCGT
GCGGTCGACGATGCGCAGTTGTTCGCACTGCATCGCGAGGCGCCGAATCCCGCGTGTCTCGTCGGGCGGCACATCCAGGG
CGTGCTGATCGACTACATCGGCGACGCGCAGCGCGCGATGGAAGCATCGCTTGCCACGCGCACCCTCGCGGACGTCACGG
CCGACGTGCTCGAATCGGAGCATCGCAGTCGGCCCGCGGGAAGCGCCGGCGGCTAA

Upstream 100 bases:

>100_bases
GCGAGTAACCCGGCACTTGCGCAATTCGCGAAATGTAATTATAGTGGTTACATATTGTCGCCGGCTGCCGTTCGGGCCGG
CGTCGTCAGATGAGTGAGCA

Downstream 100 bases:

>100_bases
GCGGTGGCGATGGATGATGCAGGGCAGGAGGCTGGGCGACGCGCACGCGCGGCGGCCGGCACGACGGAGTTCCGCTCCGT
TTTTTTTCGGTCTTATATGT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MNTSSRFAFAVHVLALLSMQEGAPLSSDIIAGSVNTNPALIRRLLSMLAAAGLTTSQLGAGGGALLAREPGKITLLDVYR
AVDDAQLFALHREAPNPACLVGRHIQGVLIDYIGDAQRAMEASLATRTLADVTADVLESEHRSRPAGSAGG

Sequences:

>Translated_151_residues
MNTSSRFAFAVHVLALLSMQEGAPLSSDIIAGSVNTNPALIRRLLSMLAAAGLTTSQLGAGGGALLAREPGKITLLDVYR
AVDDAQLFALHREAPNPACLVGRHIQGVLIDYIGDAQRAMEASLATRTLADVTADVLESEHRSRPAGSAGG
>Mature_151_residues
MNTSSRFAFAVHVLALLSMQEGAPLSSDIIAGSVNTNPALIRRLLSMLAAAGLTTSQLGAGGGALLAREPGKITLLDVYR
AVDDAQLFALHREAPNPACLVGRHIQGVLIDYIGDAQRAMEASLATRTLADVTADVLESEHRSRPAGSAGG

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15674; Mature: 15674

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSSRFAFAVHVLALLSMQEGAPLSSDIIAGSVNTNPALIRRLLSMLAAAGLTTSQLGA
CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCHHHCCC
GGGALLAREPGKITLLDVYRAVDDAQLFALHREAPNPACLVGRHIQGVLIDYIGDAQRAM
CCCEEEECCCCCEEHHHHHHHHCHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHCCHHHHH
EASLATRTLADVTADVLESEHRSRPAGSAGG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNTSSRFAFAVHVLALLSMQEGAPLSSDIIAGSVNTNPALIRRLLSMLAAAGLTTSQLGA
CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCHHHCCC
GGGALLAREPGKITLLDVYRAVDDAQLFALHREAPNPACLVGRHIQGVLIDYIGDAQRAM
CCCEEEECCCCCEEHHHHHHHHCHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHCCHHHHH
EASLATRTLADVTADVLESEHRSRPAGSAGG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]