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The map label for this gene is ywnB [H]

Identifier: 115351143

GI number: 115351143

Start: 1189976

End: 1190617

Strand: Direct

Name: ywnB [H]

Synonym: Bamb_1089

Alternate gene names: 115351143

Gene position: 1189976-1190617 (Clockwise)

Preceding gene: 115351142

Following gene: 115351144

Centisome position: 33.46

GC content: 69.78

Gene sequence:

>642_bases
ATGACGCAACGTACCCTGAACATCGCACTGTTTGGCGCCACCGGGATGATCGGTTCGCGCATCGCCGCCGAAGCCGCGCG
CCGCGGCCATCGCGTGACCGCGCTGTCGCGCCACCCGGGCGCGTCCGCCGACGGCGTCGTCGCGAAGGGGGCCGACCTGT
TCGATGCGGCGAGCATCGCGGCCGCGCTGCCGGGTCACGACGTCGTCGCGAGCGCGTACGGTCCGAAGCAGGACGATGCC
GCGAAGGTCGTCGCGGCGGCAAAGGCGCTAGTGGCCGGCACGCGTCAGGCAGGCCTGAAGCGGCTCGTGGTGGTGGGCGG
CGCCGGTTCGCTCGAAGTTGCGCCGGGCAAGCAACTGGTCGACACCGAAGGCTTCCCGGATGCGTACAAGGCGGTCGCGC
TCGCGCACCGCGATGCGCTCGACTATCTGCAGACGGTCGGTGATCTCGACTGGACGTTCTTCGCGCCGGCCGCCATGATC
GCGCCGGGCGAGTGCACGGGCACGTTCCGCACCGGCGTCGGCAAGCTGATCGTGGACGCGCAGGGCAACAGCCAGATCTC
GGCGGAAGACTACGCGGTCGCGTTCGTCGATGCGCTCGAGCAAGACAGCTTCGTGCGCGAGATCGCGACGGTCGCGTATT
GA

Upstream 100 bases:

>100_bases
GACGCGCACGCGCGGCGGCCGGCACGACGGAGTTCCGCTCCGTTTTTTTTCGGTCTTATATGTAATCACTTTAGTTACTT
TTTCTTTCTGGAGAATCGAC

Downstream 100 bases:

>100_bases
GCGATATCGCGAGATCACGGCGAGGCGGCGCGCGCGTGGCGCATTCTCCGTGAGCGTCCGTGCGCATTCGTAAGCGCCCG
GCAGCCCACGCGGTCGCAAC

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTQRTLNIALFGATGMIGSRIAAEAARRGHRVTALSRHPGASADGVVAKGADLFDAASIAAALPGHDVVASAYGPKQDDA
AKVVAAAKALVAGTRQAGLKRLVVVGGAGSLEVAPGKQLVDTEGFPDAYKAVALAHRDALDYLQTVGDLDWTFFAPAAMI
APGECTGTFRTGVGKLIVDAQGNSQISAEDYAVAFVDALEQDSFVREIATVAY

Sequences:

>Translated_213_residues
MTQRTLNIALFGATGMIGSRIAAEAARRGHRVTALSRHPGASADGVVAKGADLFDAASIAAALPGHDVVASAYGPKQDDA
AKVVAAAKALVAGTRQAGLKRLVVVGGAGSLEVAPGKQLVDTEGFPDAYKAVALAHRDALDYLQTVGDLDWTFFAPAAMI
APGECTGTFRTGVGKLIVDAQGNSQISAEDYAVAFVDALEQDSFVREIATVAY
>Mature_212_residues
TQRTLNIALFGATGMIGSRIAAEAARRGHRVTALSRHPGASADGVVAKGADLFDAASIAAALPGHDVVASAYGPKQDDAA
KVVAAAKALVAGTRQAGLKRLVVVGGAGSLEVAPGKQLVDTEGFPDAYKAVALAHRDALDYLQTVGDLDWTFFAPAAMIA
PGECTGTFRTGVGKLIVDAQGNSQISAEDYAVAFVDALEQDSFVREIATVAY

Specific function: Unknown

COG id: COG2910

COG function: function code R; Putative NADH-flavin reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: NA

Molecular weight: Translated: 21842; Mature: 21711

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQRTLNIALFGATGMIGSRIAAEAARRGHRVTALSRHPGASADGVVAKGADLFDAASIA
CCCEEEEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEECCCCHHHHHHHH
AALPGHDVVASAYGPKQDDAAKVVAAAKALVAGTRQAGLKRLVVVGGAGSLEVAPGKQLV
HHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCHHHCCEEEEEECCCCCEEECCCCCEE
DTEGFPDAYKAVALAHRDALDYLQTVGDLDWTFFAPAAMIAPGECTGTFRTGVGKLIVDA
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEECCCCCCCHHHCCCCEEEEEC
QGNSQISAEDYAVAFVDALEQDSFVREIATVAY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQRTLNIALFGATGMIGSRIAAEAARRGHRVTALSRHPGASADGVVAKGADLFDAASIA
CCEEEEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEECCCCHHHHHHHH
AALPGHDVVASAYGPKQDDAAKVVAAAKALVAGTRQAGLKRLVVVGGAGSLEVAPGKQLV
HHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCHHHCCEEEEEECCCCCEEECCCCCEE
DTEGFPDAYKAVALAHRDALDYLQTVGDLDWTFFAPAAMIAPGECTGTFRTGVGKLIVDA
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEECCCCCCCHHHCCCCEEEEEC
QGNSQISAEDYAVAFVDALEQDSFVREIATVAY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]