Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351141

Identifier: 115351141

GI number: 115351141

Start: 1188862

End: 1189290

Strand: Direct

Name: 115351141

Synonym: Bamb_1087

Alternate gene names: NA

Gene position: 1188862-1189290 (Clockwise)

Preceding gene: 115351131

Following gene: 115351142

Centisome position: 33.43

GC content: 72.49

Gene sequence:

>429_bases
ATGAAGATGAAGACTTCGCGGGCGCGTCGCGCGCCCGGGTTCGTGCTGGCGGCCGCGGCCGTCGGTGCTCTGCTGTTGCT
CGCAGGCTGCGAGAAGTCCGGCACGCCGGCCCAGCAAGCCGATACGGCCGCAAGCGCGGCCACCGATGCTGCCAACAGCG
CGGCCAAGGCGCTCGACCAGGTGGCGAGCACCGTCAACCGGCAGCTCAATGCCGCGAAGGCCGGCATCGCGAGCGCGGCC
TCGGCCGTGCCGCCGCTGTCCGCGAGCGGTCTCGCGTCGGCCGCGCAGGCGCAGCTCGACGCGGCCGCTTCCGCGGTCGT
CGCGCATGCGGCGTCCGAAGCGGGCGCGAAAATGGCGGAAGCCGGCAAGAAGCTGCAGCAGTGGAGCCAGCAGAATGCGT
CCGGCGCGAAGCCTGCCAGCGGCGAGTAA

Upstream 100 bases:

>100_bases
CATTTTTAAGCGGGAGTGGTCAGTGGCCCTGTTCCACAAGCGGTATCATCGGCATCGGTCCAACCATTCAGGCCGTGCGG
CGCACGGCCGGAGATTGCTG

Downstream 100 bases:

>100_bases
CCCGGCACTTGCGCAATTCGCGAAATGTAATTATAGTGGTTACATATTGTCGCCGGCTGCCGTTCGGGCCGGCGTCGTCA
GATGAGTGAGCAATGAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKMKTSRARRAPGFVLAAAAVGALLLLAGCEKSGTPAQQADTAASAATDAANSAAKALDQVASTVNRQLNAAKAGIASAA
SAVPPLSASGLASAAQAQLDAAASAVVAHAASEAGAKMAEAGKKLQQWSQQNASGAKPASGE

Sequences:

>Translated_142_residues
MKMKTSRARRAPGFVLAAAAVGALLLLAGCEKSGTPAQQADTAASAATDAANSAAKALDQVASTVNRQLNAAKAGIASAA
SAVPPLSASGLASAAQAQLDAAASAVVAHAASEAGAKMAEAGKKLQQWSQQNASGAKPASGE
>Mature_142_residues
MKMKTSRARRAPGFVLAAAAVGALLLLAGCEKSGTPAQQADTAASAATDAANSAAKALDQVASTVNRQLNAAKAGIASAA
SAVPPLSASGLASAAQAQLDAAASAVVAHAASEAGAKMAEAGKKLQQWSQQNASGAKPASGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13667; Mature: 13667

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKTSRARRAPGFVLAAAAVGALLLLAGCEKSGTPAQQADTAASAATDAANSAAKALDQ
CCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VASTVNRQLNAAKAGIASAASAVPPLSASGLASAAQAQLDAAASAVVAHAASEAGAKMAE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGKKLQQWSQQNASGAKPASGE
HHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKMKTSRARRAPGFVLAAAAVGALLLLAGCEKSGTPAQQADTAASAATDAANSAAKALDQ
CCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VASTVNRQLNAAKAGIASAASAVPPLSASGLASAAQAQLDAAASAVVAHAASEAGAKMAE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGKKLQQWSQQNASGAKPASGE
HHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA