Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351056

Identifier: 115351056

GI number: 115351056

Start: 1091020

End: 1091484

Strand: Direct

Name: 115351056

Synonym: Bamb_1002

Alternate gene names: NA

Gene position: 1091020-1091484 (Clockwise)

Preceding gene: 115351055

Following gene: 115351057

Centisome position: 30.68

GC content: 74.41

Gene sequence:

>465_bases
TTGACGAGTCCAATCGATGCTCCGGCCGGGCGTCCGCAGCGCTTTGCGTTGCGGGCCTCGGCCGTGTCGTATGTCGTGCT
GGCCGCGTTCGTCGCGGCGGCTGCCGCATCCGTGTACCTGTTCTGGGCGCCGCGGGCCGGTGCCGCCGCCGGCGCGTGCG
TGTCCGCGGCGACGGCCGCGCTGCTTGCCGTGTGTGCCACGCGGGCCTGTGCCCGTCGGCTGCCGGCCGAATTGCGGATC
GATGCATTCGGGGAGATTGCGGCGTTTGGCCGCACCGGGCGTTTGCTGGCCCGTGGCCGCGTGACCGGCCATGCGCACTG
GAGCAGCCTGCTGCTCGTGCTGTCGGTCGGGCAGGGCGCCCGGCGCGCCCGGCCGCTGCTGATTCCGGCCGATGCGCTCG
ACGCCGCGTCGTTCAGCGCGCTGTCCGTGCTGGCGCGTACGGCGGGCACGGCGGCGCGGGCATGA

Upstream 100 bases:

>100_bases
CGCGCGGGACATGAAGATCGACGTGGCCGTGAAGAACAACTTCGGCTTCGGTGGTACCAACGGCACGCTGGTGTTCAAGC
GCGTCTGACGTCGAAATCGC

Downstream 100 bases:

>100_bases
CGGCGGCTTGGTTACCTACCGTAACCAGCGGCCGGCGCCGGAACGCTACAATAACGCTCCGCGTTGCATCCCTAGTTAAC
GGATTTGTCAGGTGAGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MTSPIDAPAGRPQRFALRASAVSYVVLAAFVAAAAASVYLFWAPRAGAAAGACVSAATAALLAVCATRACARRLPAELRI
DAFGEIAAFGRTGRLLARGRVTGHAHWSSLLLVLSVGQGARRARPLLIPADALDAASFSALSVLARTAGTAARA

Sequences:

>Translated_154_residues
MTSPIDAPAGRPQRFALRASAVSYVVLAAFVAAAAASVYLFWAPRAGAAAGACVSAATAALLAVCATRACARRLPAELRI
DAFGEIAAFGRTGRLLARGRVTGHAHWSSLLLVLSVGQGARRARPLLIPADALDAASFSALSVLARTAGTAARA
>Mature_153_residues
TSPIDAPAGRPQRFALRASAVSYVVLAAFVAAAAASVYLFWAPRAGAAAGACVSAATAALLAVCATRACARRLPAELRID
AFGEIAAFGRTGRLLARGRVTGHAHWSSLLLVLSVGQGARRARPLLIPADALDAASFSALSVLARTAGTAARA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15625; Mature: 15494

Theoretical pI: Translated: 12.12; Mature: 12.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPIDAPAGRPQRFALRASAVSYVVLAAFVAAAAASVYLFWAPRAGAAAGACVSAATAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHH
LLAVCATRACARRLPAELRIDAFGEIAAFGRTGRLLARGRVTGHAHWSSLLLVLSVGQGA
HHHHHHHHHHHHHCCHHEECCCHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCC
RRARPLLIPADALDAASFSALSVLARTAGTAARA
HHCCCEEEECCHHCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TSPIDAPAGRPQRFALRASAVSYVVLAAFVAAAAASVYLFWAPRAGAAAGACVSAATAA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHH
LLAVCATRACARRLPAELRIDAFGEIAAFGRTGRLLARGRVTGHAHWSSLLLVLSVGQGA
HHHHHHHHHHHHHCCHHEECCCHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCC
RRARPLLIPADALDAASFSALSVLARTAGTAARA
HHCCCEEEECCHHCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA