Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is pgm [H]

Identifier: 115350826

GI number: 115350826

Start: 860551

End: 862014

Strand: Direct

Name: pgm [H]

Synonym: Bamb_0772

Alternate gene names: 115350826

Gene position: 860551-862014 (Clockwise)

Preceding gene: 115350820

Following gene: 115350827

Centisome position: 24.2

GC content: 66.94

Gene sequence:

>1464_bases
ATGTATGATGCCGGGCACGCGCGAAAGGCGGCCAGATTATTTTCCATGCACGCAACCGAGAGAGAATCGATGATCTCCCA
ATCCATCTTCAAGGCATATGACATTCGCGGTGTGGTCGGCAAGACGCTCGACGCCGACACGGCGCGCGGGATCGGCCGGG
CATTCGGCAGCGAAGTGCGCGCCCAGGGCGGCGACGCGGTCGTCGTCGCGCGCGACGGCCGCCTATCGGGGCCCGAGCTC
GTCGGCGCACTCGCCGATGGCCTGCGTGCGGCCGGTGTCGACGTCGTCGACGTCGGCATGGTGCCCACGCCGGTCGGCTA
TTTCGCGGCGAGCGTGCCGCTTGCACTGAAGGGCGGCGAACGCCGCGTCGATTCGTGCATCGTCGTCACGGGCAGCCACA
ATCCGCCCGACTACAACGGCTTCAAGATGGTGCTGCGCGGCGCCGCGATCTACGGCGAGCAGATCCAGGCGCTGTACCGC
CGCATCGTCGACGAGCGTTTCGAAACGGGCAGCGGCACGTTCGAGGAGTTCGACGTCGCGGATCAGTACATCGCGCGCAT
CGTCGGCGACGTGAAGCTCGCGCGCCCGCTGAAGCTCGTCGTCGATGCCGGCAACGGCGTCGCGGGCCCGCTCGCGACGC
GCCTGTTCAAGGCGCTCGGCTGCGAACTCGTCGAGCGCTTCACCGACATCGACGGCACGTTCCCGAACCACCACCCCGAT
CCCGCGCACCCGGAAAACCTGCAGGACGTGATCCAGGCGCTGAAGGACACCGACGCCGAACTCGGCTTCGCGTTCGACGG
CGACGGCGACCGCCTGGGCGTCGTCACGAAGGACGGCCAGATCATCTACCCGGACCGCCAGCTGATGCTGTTCGCGGAGG
AAGTGCTGTCGCGCAATCCGGGCGCGCAGATCATCTACGACGTGAAGTGCACGCGCCATCTCGCGCAGTGGGTGAAGGCG
AAGGGCGGCGAGCCGCTGATGTGGAAGACGGGCCATTCGCTCGTGAAGGCGAAGCTGCGCGAGACGGGTGCGCCGCTCGC
CGGCGAGATGAGCGGCCACGTGTTCTTCAAGGACCGCTGGTACGGCTTCGACGACGGCCTCTACACGGGCGCGCGCCTGC
TGGAGATCCTCGCGAAGACGGCCGATCCGAGCGCGCTGCTGAACGGCTTGCCGGACGCGATGAGCACGCCCGAGCTGCAG
CTCTGGCTCGACGAAGGCGAGAACTTCCGCCTGATCGACAAGCTGCAGAAAGAGGCGAAGTTCGACGGTGCCGAGGAAGT
CGTGACGATCGACGGCCTGCGCGTCGAGTACCCGGACGGTTTCGGCCTCGCGCGTTCGTCGAACACGACGCCGGTCGTCG
TGATGCGGTTCGAATCGGAGACCAAGGAAGGGCTCAAGCGCATTCAGGAGGACTTCCGCCGCGTGCTGACGGCCGCGAAG
CCGGACGTCAAGCTGCCGTTCTGA

Upstream 100 bases:

>100_bases
TAGGCATTAAAATGGGCAGAATGCGCGTCATCAAAACCCGCGATTATAAGTTGGATCGCGGCCGCACCAGCCGCCCGGTT
CCTTGTCGCGCAAGGCCCGC

Downstream 100 bases:

>100_bases
ACTCCGGCGGCCTGCGGGCCGCCGCCGGCGCGACGCTCGCACGAGCCGTCGCGCCATCCCCGAAAAGCGGCGCACGCTCA
CGCGTGCGGCCGCTTTTTGT

Product: phosphomannomutase

Products: NA

Alternate protein names: PGM; Glucose phosphomutase [H]

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MYDAGHARKAARLFSMHATERESMISQSIFKAYDIRGVVGKTLDADTARGIGRAFGSEVRAQGGDAVVVARDGRLSGPEL
VGALADGLRAAGVDVVDVGMVPTPVGYFAASVPLALKGGERRVDSCIVVTGSHNPPDYNGFKMVLRGAAIYGEQIQALYR
RIVDERFETGSGTFEEFDVADQYIARIVGDVKLARPLKLVVDAGNGVAGPLATRLFKALGCELVERFTDIDGTFPNHHPD
PAHPENLQDVIQALKDTDAELGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTRHLAQWVKA
KGGEPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILAKTADPSALLNGLPDAMSTPELQ
LWLDEGENFRLIDKLQKEAKFDGAEEVVTIDGLRVEYPDGFGLARSSNTTPVVVMRFESETKEGLKRIQEDFRRVLTAAK
PDVKLPF

Sequences:

>Translated_487_residues
MYDAGHARKAARLFSMHATERESMISQSIFKAYDIRGVVGKTLDADTARGIGRAFGSEVRAQGGDAVVVARDGRLSGPEL
VGALADGLRAAGVDVVDVGMVPTPVGYFAASVPLALKGGERRVDSCIVVTGSHNPPDYNGFKMVLRGAAIYGEQIQALYR
RIVDERFETGSGTFEEFDVADQYIARIVGDVKLARPLKLVVDAGNGVAGPLATRLFKALGCELVERFTDIDGTFPNHHPD
PAHPENLQDVIQALKDTDAELGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTRHLAQWVKA
KGGEPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILAKTADPSALLNGLPDAMSTPELQ
LWLDEGENFRLIDKLQKEAKFDGAEEVVTIDGLRVEYPDGFGLARSSNTTPVVVMRFESETKEGLKRIQEDFRRVLTAAK
PDVKLPF
>Mature_487_residues
MYDAGHARKAARLFSMHATERESMISQSIFKAYDIRGVVGKTLDADTARGIGRAFGSEVRAQGGDAVVVARDGRLSGPEL
VGALADGLRAAGVDVVDVGMVPTPVGYFAASVPLALKGGERRVDSCIVVTGSHNPPDYNGFKMVLRGAAIYGEQIQALYR
RIVDERFETGSGTFEEFDVADQYIARIVGDVKLARPLKLVVDAGNGVAGPLATRLFKALGCELVERFTDIDGTFPNHHPD
PAHPENLQDVIQALKDTDAELGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTRHLAQWVKA
KGGEPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILAKTADPSALLNGLPDAMSTPELQ
LWLDEGENFRLIDKLQKEAKFDGAEEVVTIDGLRVEYPDGFGLARSSNTTPVVVMRFESETKEGLKRIQEDFRRVLTAAK
PDVKLPF

Specific function: This enzyme participates in both the breakdown and synthesis of glucose [H]

COG id: COG1109

COG function: function code G; Phosphomannomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphohexose mutase family [H]

Homologues:

Organism=Escherichia coli, GI1788361, Length=451, Percent_Identity=36.5853658536585, Blast_Score=223, Evalue=3e-59,
Organism=Escherichia coli, GI1789566, Length=480, Percent_Identity=27.2916666666667, Blast_Score=83, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005844
- InterPro:   IPR016055
- InterPro:   IPR005845
- InterPro:   IPR005846
- InterPro:   IPR005843
- InterPro:   IPR016066
- InterPro:   IPR005841 [H]

Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]

EC number: =5.4.2.2 [H]

Molecular weight: Translated: 53126; Mature: 53126

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDAGHARKAARLFSMHATERESMISQSIFKAYDIRGVVGKTLDADTARGIGRAFGSEVR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHH
AQGGDAVVVARDGRLSGPELVGALADGLRAAGVDVVDVGMVPTPVGYFAASVPLALKGGE
CCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHCCCEEECCCC
RRVDSCIVVTGSHNPPDYNGFKMVLRGAAIYGEQIQALYRRIVDERFETGSGTFEEFDVA
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
DQYIARIVGDVKLARPLKLVVDAGNGVAGPLATRLFKALGCELVERFTDIDGTFPNHHPD
HHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PAHPENLQDVIQALKDTDAELGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNP
CCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCEEECCCHHHHHHHHHHHCCCC
GAQIIYDVKCTRHLAQWVKAKGGEPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRW
CCCEEEEHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEECCC
YGFDDGLYTGARLLEILAKTADPSALLNGLPDAMSTPELQLWLDEGENFRLIDKLQKEAK
CCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHC
FDGAEEVVTIDGLRVEYPDGFGLARSSNTTPVVVMRFESETKEGLKRIQEDFRRVLTAAK
CCCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC
PDVKLPF
CCCCCCC
>Mature Secondary Structure
MYDAGHARKAARLFSMHATERESMISQSIFKAYDIRGVVGKTLDADTARGIGRAFGSEVR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHH
AQGGDAVVVARDGRLSGPELVGALADGLRAAGVDVVDVGMVPTPVGYFAASVPLALKGGE
CCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHCCCEEECCCC
RRVDSCIVVTGSHNPPDYNGFKMVLRGAAIYGEQIQALYRRIVDERFETGSGTFEEFDVA
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
DQYIARIVGDVKLARPLKLVVDAGNGVAGPLATRLFKALGCELVERFTDIDGTFPNHHPD
HHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PAHPENLQDVIQALKDTDAELGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNP
CCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCEEECCCHHHHHHHHHHHCCCC
GAQIIYDVKCTRHLAQWVKAKGGEPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRW
CCCEEEEHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEECCC
YGFDDGLYTGARLLEILAKTADPSALLNGLPDAMSTPELQLWLDEGENFRLIDKLQKEAK
CCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHC
FDGAEEVVTIDGLRVEYPDGFGLARSSNTTPVVVMRFESETKEGLKRIQEDFRRVLTAAK
CCCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC
PDVKLPF
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8157643; 8188595 [H]