Click here to switch to the map view.

The map label for this gene is 115350782

Identifier: 115350782

GI number: 115350782

Start: 809698

End: 810483

Strand: Direct

Name: 115350782

Synonym: Bamb_0728

Alternate gene names: NA

Gene position: 809698-810483 (Clockwise)

Preceding gene: 115350781

Following gene: 115350783

Centisome position: 22.77

GC content: 73.16

Gene sequence:

>786_bases
ATGATGGACGACGATCCGCGCAAACCTTCGAACGATCGGGACGATGCTGCATCGGCCCAGCTGCTGTCGGCGCTGCTCGA
CGGCGAGCTGTCCGGGCAGGAGCGCCGCGAGGTGCTCGAGCGGCTGGAGTCCGATCCGCGGGAAGCCGACCGGTTCGCGC
ATTACGGCGCGCAGCGCGACGCGTTGCGCGCGCTGTTCCCGCTGCCGGGCGCCGCATCGGCATTGTTCGTGCAGCGGCGC
GCGTCGCGTCGGCGCGTGGTTGCCTATGCGTTCGCGGGGCTGGCGGCCGGGCTGGTGCTCGGCATCGCGCTGCACGCGGG
CTGGACGGCGTTCGGCGTCGAACCGGCATTCGCCGCGCGCGCGGATGTCGCGTATGCCGTGTACGCGGCCGATCGTGAAC
ACCCGGTCGAAATCGACGCCCGCGATCCGGCGCGTCTGGCCGGATGGCTGTCCGCGCGTCTCGGTCGGCCCGTGCGCGCG
CCGTCGCTCGACGAATACGGCTACGCGCTGCTGGGCGGGCGGCTGCTGCCGGGCGACGCGGGGCCGGCCGCGCAGTTGAT
GTACCAGCGCGCGGACGGCGCGCGCGTGACGCTGTACATGACGGCCTACGATGCGCGGCGCCTCGCGCCGCAGGCGATGT
CGGCGGACGGACGCTACACGTATTTCTGGTCGGATCGCGGCATGGGCTACGCGCTGTCCGGCCGCGGCGACGAACGGCGC
CTGCGCGAGCTCGCGATCGACGCATGCGGCGCGCTCGGCGGGCCGACCGACGCATGGAAGGGGTGA

Upstream 100 bases:

>100_bases
TGATGTCGCGGCTGTCGCGGGCGCGTGAACAGATGCGTGCGTTGCTGTCCGGCGAGCCGCCGGCGCACGGCACGGCCACG
TTACGGGTGATCGGGAAGAC

Downstream 100 bases:

>100_bases
CGCGCGCGGCATCGGCAAGGAGCAGAAGATGAACGCGAAGAAGACGGCGATGATGGCGACGGTGGTAGCGGTGCTCGCGG
GCGCCGGGCTCGCGCGGGCG

Product: putative transmembrane anti-sigma factor

Products: NA

Alternate protein names: Transmembrane Transcriptional Regulator; Anti-Sigma Factor; Transmembrane Regulator; Transmembrane Protein; PrtR Transmembrane Transcriptional Regulator; Transcriptional Regulator; Transmembrane Regulator PrtR; Transmembrane Transcription Regulator

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MMDDDPRKPSNDRDDAASAQLLSALLDGELSGQERREVLERLESDPREADRFAHYGAQRDALRALFPLPGAASALFVQRR
ASRRRVVAYAFAGLAAGLVLGIALHAGWTAFGVEPAFAARADVAYAVYAADREHPVEIDARDPARLAGWLSARLGRPVRA
PSLDEYGYALLGGRLLPGDAGPAAQLMYQRADGARVTLYMTAYDARRLAPQAMSADGRYTYFWSDRGMGYALSGRGDERR
LRELAIDACGALGGPTDAWKG

Sequences:

>Translated_261_residues
MMDDDPRKPSNDRDDAASAQLLSALLDGELSGQERREVLERLESDPREADRFAHYGAQRDALRALFPLPGAASALFVQRR
ASRRRVVAYAFAGLAAGLVLGIALHAGWTAFGVEPAFAARADVAYAVYAADREHPVEIDARDPARLAGWLSARLGRPVRA
PSLDEYGYALLGGRLLPGDAGPAAQLMYQRADGARVTLYMTAYDARRLAPQAMSADGRYTYFWSDRGMGYALSGRGDERR
LRELAIDACGALGGPTDAWKG
>Mature_261_residues
MMDDDPRKPSNDRDDAASAQLLSALLDGELSGQERREVLERLESDPREADRFAHYGAQRDALRALFPLPGAASALFVQRR
ASRRRVVAYAFAGLAAGLVLGIALHAGWTAFGVEPAFAARADVAYAVYAADREHPVEIDARDPARLAGWLSARLGRPVRA
PSLDEYGYALLGGRLLPGDAGPAAQLMYQRADGARVTLYMTAYDARRLAPQAMSADGRYTYFWSDRGMGYALSGRGDERR
LRELAIDACGALGGPTDAWKG

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28287; Mature: 28287

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDDDPRKPSNDRDDAASAQLLSALLDGELSGQERREVLERLESDPREADRFAHYGAQRD
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHH
ALRALFPLPGAASALFVQRRASRRRVVAYAFAGLAAGLVLGIALHAGWTAFGVEPAFAAR
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHH
ADVAYAVYAADREHPVEIDARDPARLAGWLSARLGRPVRAPSLDEYGYALLGGRLLPGDA
HHHEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEECCCCC
GPAAQLMYQRADGARVTLYMTAYDARRLAPQAMSADGRYTYFWSDRGMGYALSGRGDERR
CHHHHHHHHCCCCCEEEEEEEECCHHHHCHHHHCCCCCEEEEECCCCCCEEECCCCHHHH
LRELAIDACGALGGPTDAWKG
HHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MMDDDPRKPSNDRDDAASAQLLSALLDGELSGQERREVLERLESDPREADRFAHYGAQRD
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHH
ALRALFPLPGAASALFVQRRASRRRVVAYAFAGLAAGLVLGIALHAGWTAFGVEPAFAAR
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHH
ADVAYAVYAADREHPVEIDARDPARLAGWLSARLGRPVRAPSLDEYGYALLGGRLLPGDA
HHHEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEECCCCC
GPAAQLMYQRADGARVTLYMTAYDARRLAPQAMSADGRYTYFWSDRGMGYALSGRGDERR
CHHHHHHHHCCCCCEEEEEEEECCHHHHCHHHHCCCCCEEEEECCCCCCEEECCCCHHHH
LRELAIDACGALGGPTDAWKG
HHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA