| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115350783
Identifier: 115350783
GI number: 115350783
Start: 810512
End: 810934
Strand: Direct
Name: 115350783
Synonym: Bamb_0729
Alternate gene names: NA
Gene position: 810512-810934 (Clockwise)
Preceding gene: 115350782
Following gene: 115350784
Centisome position: 22.79
GC content: 69.98
Gene sequence:
>423_bases ATGAACGCGAAGAAGACGGCGATGATGGCGACGGTGGTAGCGGTGCTCGCGGGCGCCGGGCTCGCGCGGGCGCAAGGCGA CGCCCCGGTGCGCGTGCCGGTCGACGCCGACGGCGTGCAGCGGGTGACGATCGTCGGCGGCAGCTATTTCTTTCGGCCGA ACCACGTGATCGTCCGCGCGCATGTGCCGGTCGAACTGACCGTATCGGCCGAACCGGGCCGCGTGCCGCACAGTTTCGAA ATCGACGCGCCGCAGGCCGGCATCGCGGTGCACACCGACCTGGCCACGACCCCGCGCACGTTCCGCTTCACGCCGACGCA GCCCGGTCGCTTCGCCTACTATTGCACGCATCGGCTGCTGTTCTTGCGCAGCCATCGCGAACGCGGCATGGAGGGCGTGC TCGACGTCGAGGCGGCGCCATGA
Upstream 100 bases:
>100_bases CGGCGCCTGCGCGAGCTCGCGATCGACGCATGCGGCGCGCTCGGCGGGCCGACCGACGCATGGAAGGGGTGACGCGCGCG GCATCGGCAAGGAGCAGAAG
Downstream 100 bases:
>100_bases TTGCCGCATTGCTGGCCGCGAGCCTGATAGGAGCGAGCATGACAGCCGACCCGGTGACCGTTGCGCAGGCACATTTCGAC CAGGTCCGCTCGTACCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MNAKKTAMMATVVAVLAGAGLARAQGDAPVRVPVDADGVQRVTIVGGSYFFRPNHVIVRAHVPVELTVSAEPGRVPHSFE IDAPQAGIAVHTDLATTPRTFRFTPTQPGRFAYYCTHRLLFLRSHRERGMEGVLDVEAAP
Sequences:
>Translated_140_residues MNAKKTAMMATVVAVLAGAGLARAQGDAPVRVPVDADGVQRVTIVGGSYFFRPNHVIVRAHVPVELTVSAEPGRVPHSFE IDAPQAGIAVHTDLATTPRTFRFTPTQPGRFAYYCTHRLLFLRSHRERGMEGVLDVEAAP >Mature_140_residues MNAKKTAMMATVVAVLAGAGLARAQGDAPVRVPVDADGVQRVTIVGGSYFFRPNHVIVRAHVPVELTVSAEPGRVPHSFE IDAPQAGIAVHTDLATTPRTFRFTPTQPGRFAYYCTHRLLFLRSHRERGMEGVLDVEAAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15131; Mature: 15131
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAKKTAMMATVVAVLAGAGLARAQGDAPVRVPVDADGVQRVTIVGGSYFFRPNHVIVRA CCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEECCEEEECCCEEEEEE HVPVELTVSAEPGRVPHSFEIDAPQAGIAVHTDLATTPRTFRFTPTQPGRFAYYCTHRLL ECCEEEEEECCCCCCCCEEEECCCCCCEEEEECCCCCCCEEEECCCCCCCEEEHHHHHHH FLRSHRERGMEGVLDVEAAP HHHHHHHCCCCCEEEEECCC >Mature Secondary Structure MNAKKTAMMATVVAVLAGAGLARAQGDAPVRVPVDADGVQRVTIVGGSYFFRPNHVIVRA CCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEECCEEEECCCEEEEEE HVPVELTVSAEPGRVPHSFEIDAPQAGIAVHTDLATTPRTFRFTPTQPGRFAYYCTHRLL ECCEEEEEECCCCCCCCEEEECCCCCCEEEEECCCCCCCEEEECCCCCCCEEEHHHHHHH FLRSHRERGMEGVLDVEAAP HHHHHHHCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA