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The map label for this gene is dgoK [H]

Identifier: 115350573

GI number: 115350573

Start: 584219

End: 585244

Strand: Direct

Name: dgoK [H]

Synonym: Bamb_0519

Alternate gene names: 115350573

Gene position: 584219-585244 (Clockwise)

Preceding gene: 115350572

Following gene: 115350574

Centisome position: 16.43

GC content: 72.51

Gene sequence:

>1026_bases
ATGACCCATTCGACCCGGACCGCTCCGGACGCCAACTCCGCCGCCCCGTCGCTGATTGCGCTCGACTGGGGCACGACGTC
GCTGCGCGCGTATCTGTTCGATGCGCACGGCGCGCTGCTCGACACGCGCAGCCGCGCGGCGGGCGTGATGCACGTGCCGG
CCGGCGGCGCGCGTGCGTTCGACGTCGTGTTCGAGGAAGCGTGCGGCGACTGGCTCGACCGCGCGCCCGGCGTGCCGGTG
CTGGCCGCCGGGATGGTCGGCAGCGCGCAGGGCTGGCGCGAGGCGCCGTACGTCGCGGTGCCGGCCGGCGCCGATGCGCT
CGTCGCGGGCCTCGTCACGGTGACGACGGCGCGCGGCACGGCGGTGTCGATCGTGCCGGGCGTGATCGCGACGGGCGAAT
TGCCCGACGTAATGCGCGGCGAAGAAACGCAGATATTCGGCGCACTCGCGAACGATTCTCTGCTTGATGCCGATCGTTCA
GGGCTACTGATCGGCTTGCCGGGCACGCATGCGAAGTGGGCGTGGGTGAAGGACGGGCTCATCGAGCGCTTCCAGACCTT
CATGACGGGCGAGCTGTTCGCGGCGCTGCGCGATCACACGATCCTCGGCCGCACGATGCGCGCGAGCCCGTCGCCCGACC
GCGCGGCATTCGCGCGCGGCGTCGCGGTCGCCCGCGGCGCGCAGCGCGCGGGGCTGCTCGCGACGATCTTCAGCACGCGC
ACGCTCGGCCTGACCGACCGGCTCGCGCCCGATGCGCAGGGCGACTACCTGTCCGGCCTGCTGATCGGCCACGAACTCGG
CGCGCTCGACGCGATGCTCGCGGAGCGCGGTGTCGCGCTCGCGAACCAGCCGCTGCTGCTGATTGGCGACGACGGATTGT
GCGCGCGCTATGTCGATGCGCTGCGCGTGTTCGGCTGCCTGCATGCGCGCGTCGTCGCGCAGGCGACCGAGCGCGGCCTG
TGGTGGATCGCATCGCGTGCCGGACTCGTGCGCGCGGACGGCGAGCCCGTCTGCGCCGATCAATGA

Upstream 100 bases:

>100_bases
ACCGGATGGATGAACTGATTCCGCTCGTGCAGCGTGAAGCGCGAGCCATTTCCGCTGAACTGGGCTGGAGCCCGCCGCAA
GGTACCCGCAGGATCAAACG

Downstream 100 bases:

>100_bases
ACCGATTTGAAGAGGAACCATCGATGTCGTCCGAACTCACGTTGCCCGCGCCGTACACGCCGCATCCCGCGTTGATGCGG
GCGTTCGACGCGTGCCCGCT

Product: 2-keto-3-deoxy-galactonokinase

Products: NA

Alternate protein names: 2-keto-3-deoxy-galactonokinase; 2-oxo-3-deoxygalactonate kinase [H]

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MTHSTRTAPDANSAAPSLIALDWGTTSLRAYLFDAHGALLDTRSRAAGVMHVPAGGARAFDVVFEEACGDWLDRAPGVPV
LAAGMVGSAQGWREAPYVAVPAGADALVAGLVTVTTARGTAVSIVPGVIATGELPDVMRGEETQIFGALANDSLLDADRS
GLLIGLPGTHAKWAWVKDGLIERFQTFMTGELFAALRDHTILGRTMRASPSPDRAAFARGVAVARGAQRAGLLATIFSTR
TLGLTDRLAPDAQGDYLSGLLIGHELGALDAMLAERGVALANQPLLLIGDDGLCARYVDALRVFGCLHARVVAQATERGL
WWIASRAGLVRADGEPVCADQ

Sequences:

>Translated_341_residues
MTHSTRTAPDANSAAPSLIALDWGTTSLRAYLFDAHGALLDTRSRAAGVMHVPAGGARAFDVVFEEACGDWLDRAPGVPV
LAAGMVGSAQGWREAPYVAVPAGADALVAGLVTVTTARGTAVSIVPGVIATGELPDVMRGEETQIFGALANDSLLDADRS
GLLIGLPGTHAKWAWVKDGLIERFQTFMTGELFAALRDHTILGRTMRASPSPDRAAFARGVAVARGAQRAGLLATIFSTR
TLGLTDRLAPDAQGDYLSGLLIGHELGALDAMLAERGVALANQPLLLIGDDGLCARYVDALRVFGCLHARVVAQATERGL
WWIASRAGLVRADGEPVCADQ
>Mature_340_residues
THSTRTAPDANSAAPSLIALDWGTTSLRAYLFDAHGALLDTRSRAAGVMHVPAGGARAFDVVFEEACGDWLDRAPGVPVL
AAGMVGSAQGWREAPYVAVPAGADALVAGLVTVTTARGTAVSIVPGVIATGELPDVMRGEETQIFGALANDSLLDADRSG
LLIGLPGTHAKWAWVKDGLIERFQTFMTGELFAALRDHTILGRTMRASPSPDRAAFARGVAVARGAQRAGLLATIFSTRT
LGLTDRLAPDAQGDYLSGLLIGHELGALDAMLAERGVALANQPLLLIGDDGLCARYVDALRVFGCLHARVVAQATERGLW
WIASRAGLVRADGEPVCADQ

Specific function: D-galactonate degradation; second step. [C]

COG id: COG3734

COG function: function code G; 2-keto-3-deoxy-galactonokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790128, Length=291, Percent_Identity=34.020618556701, Blast_Score=133, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007729 [H]

Pfam domain/function: PF05035 DGOK [H]

EC number: =2.7.1.58 [H]

Molecular weight: Translated: 35613; Mature: 35482

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHSTRTAPDANSAAPSLIALDWGTTSLRAYLFDAHGALLDTRSRAAGVMHVPAGGARAF
CCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCEECCCCCCCEEEECCCCCHHH
DVVFEEACGDWLDRAPGVPVLAAGMVGSAQGWREAPYVAVPAGADALVAGLVTVTTARGT
HHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHEEECCCC
AVSIVPGVIATGELPDVMRGEETQIFGALANDSLLDADRSGLLIGLPGTHAKWAWVKDGL
EEEECCCEEECCCCCHHHCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCEEHHHHHHH
IERFQTFMTGELFAALRDHTILGRTMRASPSPDRAAFARGVAVARGAQRAGLLATIFSTR
HHHHHHHHHHHHHHHHHCCHHCCCEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCC
TLGLTDRLAPDAQGDYLSGLLIGHELGALDAMLAERGVALANQPLLLIGDDGLCARYVDA
CCCCHHCCCCCCCCCHHHHEEHHHHHHHHHHHHHHCCCEECCCCEEEECCCCHHHHHHHH
LRVFGCLHARVVAQATERGLWWIASRAGLVRADGEPVCADQ
HHHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCCCCCCCC
>Mature Secondary Structure 
THSTRTAPDANSAAPSLIALDWGTTSLRAYLFDAHGALLDTRSRAAGVMHVPAGGARAF
CCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCEECCCCCCCEEEECCCCCHHH
DVVFEEACGDWLDRAPGVPVLAAGMVGSAQGWREAPYVAVPAGADALVAGLVTVTTARGT
HHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHEEECCCC
AVSIVPGVIATGELPDVMRGEETQIFGALANDSLLDADRSGLLIGLPGTHAKWAWVKDGL
EEEECCCEEECCCCCHHHCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCEEHHHHHHH
IERFQTFMTGELFAALRDHTILGRTMRASPSPDRAAFARGVAVARGAQRAGLLATIFSTR
HHHHHHHHHHHHHHHHHCCHHCCCEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCC
TLGLTDRLAPDAQGDYLSGLLIGHELGALDAMLAERGVALANQPLLLIGDDGLCARYVDA
CCCCHHCCCCCCCCCHHHHEEHHHHHHHHHHHHHHCCCEECCCCEEEECCCCHHHHHHHH
LRVFGCLHARVVAQATERGLWWIASRAGLVRADGEPVCADQ
HHHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]