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The map label for this gene is dgoA [H]

Identifier: 115350574

GI number: 115350574

Start: 585268

End: 585945

Strand: Direct

Name: dgoA [H]

Synonym: Bamb_0520

Alternate gene names: 115350574

Gene position: 585268-585945 (Clockwise)

Preceding gene: 115350573

Following gene: 115350575

Centisome position: 16.46

GC content: 74.04

Gene sequence:

>678_bases
ATGTCGTCCGAACTCACGTTGCCCGCGCCGTACACGCCGCATCCCGCGTTGATGCGGGCGTTCGACGCGTGCCCGCTGAT
CGCGATCATGCGCGGCATCACGCCCACCGAAGCGGCCGACCACGGCCTTGCGCTGCACGAAGCCGGCGTGCGGATCGTCG
AGGTGCCGCTCAACTCGCCCGATCCGTTCGACAGCATCGCGGCGCTGCGCCGCGCGTTGCCGGACGACATGATCGTCGGC
GCGGGCACCGTGCTGCGCGCCGAATTCGTCGACCGCGTGCAGGACGCCGGCGGCACGCTGATCGTGATGCCGCACAGCGA
CGCGGCCGTGATCCGCCGCGCGCGCGAGCGCGGGCTCGCGAGCGCCCCGGGCGTCGCGACGCCGACCGAGGCGTTCGCCG
CGCTCGCGAACGGCGCCGACGTGCTGAAGATGTTCCCGGCCGAGCAGCTCGGCGTGCCCGTCGTGAAGGCGTGGCGCGCG
GTGATCGACCGCGCGGTGCCGCTGCTTCCGGTCGGCGGGATCACGCCGGATAACATGCAGCCGTTCCTCGCGGCCGGTGC
CAACGGCTTCGGCCTCGGCTCGGCGCTGTACCGGCCCGGCCAGTCGGCGGACGCGACGCTCGCGAATGCGCGCGCGTTCC
AGGCCGGCCTGCGCGCGGCGCTGGGCGGAGCCGCATGA

Upstream 100 bases:

>100_bases
AGCGCGGCCTGTGGTGGATCGCATCGCGTGCCGGACTCGTGCGCGCGGACGGCGAGCCCGTCTGCGCCGATCAATGAACC
GATTTGAAGAGGAACCATCG

Downstream 100 bases:

>100_bases
TGGGACGGCTCGCGGGCAAGGTCGCGGTGGTGACGGGCGCGGGCCGCGGGATCGGCGCCGCGATCGCGCAGGCGTTCGCG
CGCGAGGGCGCGGCCGTCGC

Product: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase

Products: NA

Alternate protein names: 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase [H]

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSSELTLPAPYTPHPALMRAFDACPLIAIMRGITPTEAADHGLALHEAGVRIVEVPLNSPDPFDSIAALRRALPDDMIVG
AGTVLRAEFVDRVQDAGGTLIVMPHSDAAVIRRARERGLASAPGVATPTEAFAALANGADVLKMFPAEQLGVPVVKAWRA
VIDRAVPLLPVGGITPDNMQPFLAAGANGFGLGSALYRPGQSADATLANARAFQAGLRAALGGAA

Sequences:

>Translated_225_residues
MSSELTLPAPYTPHPALMRAFDACPLIAIMRGITPTEAADHGLALHEAGVRIVEVPLNSPDPFDSIAALRRALPDDMIVG
AGTVLRAEFVDRVQDAGGTLIVMPHSDAAVIRRARERGLASAPGVATPTEAFAALANGADVLKMFPAEQLGVPVVKAWRA
VIDRAVPLLPVGGITPDNMQPFLAAGANGFGLGSALYRPGQSADATLANARAFQAGLRAALGGAA
>Mature_224_residues
SSELTLPAPYTPHPALMRAFDACPLIAIMRGITPTEAADHGLALHEAGVRIVEVPLNSPDPFDSIAALRRALPDDMIVGA
GTVLRAEFVDRVQDAGGTLIVMPHSDAAVIRRARERGLASAPGVATPTEAFAALANGADVLKMFPAEQLGVPVVKAWRAV
IDRAVPLLPVGGITPDNMQPFLAAGANGFGLGSALYRPGQSADATLANARAFQAGLRAALGGAA

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994954, Length=204, Percent_Identity=46.5686274509804, Blast_Score=163, Evalue=1e-41,
Organism=Escherichia coli, GI1788156, Length=143, Percent_Identity=34.965034965035, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.2.21 [H]

Molecular weight: Translated: 23169; Mature: 23038

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSELTLPAPYTPHPALMRAFDACPLIAIMRGITPTEAADHGLALHEAGVRIVEVPLNSP
CCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCHHHHCCEEEHHCCCEEEEEECCCC
DPFDSIAALRRALPDDMIVGAGTVLRAEFVDRVQDAGGTLIVMPHSDAAVIRRARERGLA
CCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCC
SAPGVATPTEAFAALANGADVLKMFPAEQLGVPVVKAWRAVIDRAVPLLPVGGITPDNMQ
CCCCCCCHHHHHHHHHCCHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCEECCCCCCCCCC
PFLAAGANGFGLGSALYRPGQSADATLANARAFQAGLRAALGGAA
HHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSELTLPAPYTPHPALMRAFDACPLIAIMRGITPTEAADHGLALHEAGVRIVEVPLNSP
CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCHHHHCCEEEHHCCCEEEEEECCCC
DPFDSIAALRRALPDDMIVGAGTVLRAEFVDRVQDAGGTLIVMPHSDAAVIRRARERGLA
CCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCC
SAPGVATPTEAFAALANGADVLKMFPAEQLGVPVVKAWRAVIDRAVPLLPVGGITPDNMQ
CCCCCCCHHHHHHHHHCCHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCEECCCCCCCCCC
PFLAAGANGFGLGSALYRPGQSADATLANARAFQAGLRAALGGAA
HHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]