| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is yhgN [C]
Identifier: 115350545
GI number: 115350545
Start: 555225
End: 555827
Strand: Direct
Name: yhgN [C]
Synonym: Bamb_0491
Alternate gene names: 115350545
Gene position: 555225-555827 (Clockwise)
Preceding gene: 115350544
Following gene: 115350548
Centisome position: 15.61
GC content: 67.83
Gene sequence:
>603_bases GTGGAATACACCTTCCTGTCGGCCACCGTGCTCCTCGTGCTGATTACGGATCCACTCGGCAACATCCCGCTGTTCATCAC GGCGATGCGGGACGTGCCGCGCGAGCGGCGCGTGAAACTGATCCTGCGCGAGGTGGGGATCGCGTTCGTGATCCTGCTGT TCTTCATGGTGGTCGGCGACCGCTTCCTGCGGATGATGAGCCTCACCGACCTGTCGCTGCGGCTCGGCGGCGGGATCGTG CTGTTCCTGATCGCGCTGCGGATGATCTTTCCGCATCCGGACGGCGCGCTCGGCACCGATCCGCGCGCGGGTGGCGAACC CTTCATCGTGCCGCTCGCGATTCCCGCGCTCGCCGGGCCGTCCGCGCTCGCGACGGTGATGCTGCTGACGTCGCAGGCGC CGGGCAAGATGTTCGAGTGGGTCGGCGCGCTGACGGTCACGATGATCGTCTGCGCGATCACGCTGGTGCTGGCCGAACGG ATCCAGCAGTGGCTCGGCGAGCGGACCGTCGCGGCGTTCGAGCGGCTGATGGGCCTCGTGCTCGTCGCGATCTCGGTCGA GATGCTGCTGGCCGGCGTGCGGGCGTTCGTGCACCAGCTGTAG
Upstream 100 bases:
>100_bases CGCGGAGGCGACGCTGCTGCCGGCGGACGAGGCTGCGGCGACGGTGACGGAGAAGATCCGCGCCGCGCTCGCGCACTAAG CGCCGCGACCGGGGGACACG
Downstream 100 bases:
>100_bases CACGGGCGGCGCGGCCGACAAAAAAAGCGGCGCTCCGGGAAACCGGAGCGCCGCTTTTCTTTATTGCCGGCCGGGCGGTC AGACGTTGGCGGTCAGCGCG
Product: multiple antibiotic resistance (MarC)--like proteins
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MEYTFLSATVLLVLITDPLGNIPLFITAMRDVPRERRVKLILREVGIAFVILLFFMVVGDRFLRMMSLTDLSLRLGGGIV LFLIALRMIFPHPDGALGTDPRAGGEPFIVPLAIPALAGPSALATVMLLTSQAPGKMFEWVGALTVTMIVCAITLVLAER IQQWLGERTVAAFERLMGLVLVAISVEMLLAGVRAFVHQL
Sequences:
>Translated_200_residues MEYTFLSATVLLVLITDPLGNIPLFITAMRDVPRERRVKLILREVGIAFVILLFFMVVGDRFLRMMSLTDLSLRLGGGIV LFLIALRMIFPHPDGALGTDPRAGGEPFIVPLAIPALAGPSALATVMLLTSQAPGKMFEWVGALTVTMIVCAITLVLAER IQQWLGERTVAAFERLMGLVLVAISVEMLLAGVRAFVHQL >Mature_200_residues MEYTFLSATVLLVLITDPLGNIPLFITAMRDVPRERRVKLILREVGIAFVILLFFMVVGDRFLRMMSLTDLSLRLGGGIV LFLIALRMIFPHPDGALGTDPRAGGEPFIVPLAIPALAGPSALATVMLLTSQAPGKMFEWVGALTVTMIVCAITLVLAER IQQWLGERTVAAFERLMGLVLVAISVEMLLAGVRAFVHQL
Specific function: Unknown
COG id: COG2095
COG function: function code U; Multiple antibiotic transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0056 (marC) family [H]
Homologues:
Organism=Escherichia coli, GI1789842, Length=193, Percent_Identity=44.0414507772021, Blast_Score=152, Evalue=1e-38, Organism=Escherichia coli, GI1787494, Length=195, Percent_Identity=26.1538461538462, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002771 [H]
Pfam domain/function: PF01914 MarC [H]
EC number: NA
Molecular weight: Translated: 21828; Mature: 21828
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYTFLSATVLLVLITDPLGNIPLFITAMRDVPRERRVKLILREVGIAFVILLFFMVVGD CCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RFLRMMSLTDLSLRLGGGIVLFLIALRMIFPHPDGALGTDPRAGGEPFIVPLAIPALAGP HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCH SALATVMLLTSQAPGKMFEWVGALTVTMIVCAITLVLAERIQQWLGERTVAAFERLMGLV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVAISVEMLLAGVRAFVHQL HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEYTFLSATVLLVLITDPLGNIPLFITAMRDVPRERRVKLILREVGIAFVILLFFMVVGD CCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RFLRMMSLTDLSLRLGGGIVLFLIALRMIFPHPDGALGTDPRAGGEPFIVPLAIPALAGP HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCH SALATVMLLTSQAPGKMFEWVGALTVTMIVCAITLVLAERIQQWLGERTVAAFERLMGLV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVAISVEMLLAGVRAFVHQL HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]