Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350456

Identifier: 115350456

GI number: 115350456

Start: 452365

End: 453276

Strand: Direct

Name: 115350456

Synonym: Bamb_0402

Alternate gene names: NA

Gene position: 452365-453276 (Clockwise)

Preceding gene: 115350455

Following gene: 115350459

Centisome position: 12.72

GC content: 65.68

Gene sequence:

>912_bases
ATGGCCCGGCGCCGCTTCACGATGTCGAACAAGACCTACGAAATCCGTCCGGAGCAGTCCGTCGAGCTGTTGAAGGAACT
GCACATCCTGACCCGCGACGGCAAGCTGAACCAGGACAGCCGCCGCAAGCTGAAGCAGGTCTATCACCTGTTCCAGTTCA
TCGAACCGTTGCTCGCGAGCGTGCAGGCCGACAAGGGCGCCGTCACGCTCGTCGATCACGGCGCCGGCAAGTCGTATCTC
GGCTTCATCCTGTACGACCTGTTCTTCAAGCAGCAGCCGGGGCACGGCACGCCGGCGTTCGCGTCGCACGTGTACGGCAT
CGAGACGCGCGAAGAGCTCGTCACGCGTTCCACCGAGCTCGCCGCGCGACTCGGATTCGGCGGGATGTCGTTCCTGAACC
TGTCGGTCGCCGACTCGATCACGTCGCCGAAGCTGCCCGAAACGGTCGATGTCGTGACCGCACTGCATGCATGCGACACG
GCGACCGACGACGCGATCCGGTTCGCGCTCGCGAAGCGCGCGCAGCACATCGTGCTGGTGCCGTGCTGCCAGGCGGAGGT
CGCGGGCGTGCTGCGCAGGAACAAGGGCAAGTCGCTTGCGAATGCGCTGACGGAAGTGTGGCGGCATCCGCTGCATACGC
GCGAATTCGGCAGCCAGATCACCAACGTGCTGCGCTGTCTGCAGCTCGAGGCGCACGGCTACCAGGTCAGCGTGACCGAG
CTGGTCGGCTGGGAGCATTCGATGAAGAACGAGCTGATCATCGCGCAGTACAAGAACCTGCCGCGCCGCAAGCCCGGCGA
ACGGCTGAACGAGATCCTCGGCATGTTCGGGCTCGCCGAACTGAACGAGCGCTTCTTCGTGCCGGCGCCCGCGGCGGCGG
AAGGCGAGGCCGTCGAGCCGGCCGCCGACTGA

Upstream 100 bases:

>100_bases
CGTCGCTCTGGCGGCTCGGCGCGCGGGCCTGATCGCGCATTTTCGGTAAACTGTCGCCATTCCTCACGAATTCACGCCGC
CGGGCCGTGGTCACCCGACC

Downstream 100 bases:

>100_bases
GGCCGACTGCGGTCGACTGACGCGCGCGGCCCGTTGGCCGCGCGATGGCCGGCCGTCGCGCGACGCGTCAGACGTCGCCG
CCCGGCCGGCGCATCCATTC

Product: hypothetical protein

Products: NA

Alternate protein names: SAM-Dependent Methyltransferase; SAM Dependent Methyltransferase; Sam-Dependent Methyltransferase; Conserved Domain Protein; Sam Dependent Methyltransferase

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MARRRFTMSNKTYEIRPEQSVELLKELHILTRDGKLNQDSRRKLKQVYHLFQFIEPLLASVQADKGAVTLVDHGAGKSYL
GFILYDLFFKQQPGHGTPAFASHVYGIETREELVTRSTELAARLGFGGMSFLNLSVADSITSPKLPETVDVVTALHACDT
ATDDAIRFALAKRAQHIVLVPCCQAEVAGVLRRNKGKSLANALTEVWRHPLHTREFGSQITNVLRCLQLEAHGYQVSVTE
LVGWEHSMKNELIIAQYKNLPRRKPGERLNEILGMFGLAELNERFFVPAPAAAEGEAVEPAAD

Sequences:

>Translated_303_residues
MARRRFTMSNKTYEIRPEQSVELLKELHILTRDGKLNQDSRRKLKQVYHLFQFIEPLLASVQADKGAVTLVDHGAGKSYL
GFILYDLFFKQQPGHGTPAFASHVYGIETREELVTRSTELAARLGFGGMSFLNLSVADSITSPKLPETVDVVTALHACDT
ATDDAIRFALAKRAQHIVLVPCCQAEVAGVLRRNKGKSLANALTEVWRHPLHTREFGSQITNVLRCLQLEAHGYQVSVTE
LVGWEHSMKNELIIAQYKNLPRRKPGERLNEILGMFGLAELNERFFVPAPAAAEGEAVEPAAD
>Mature_302_residues
ARRRFTMSNKTYEIRPEQSVELLKELHILTRDGKLNQDSRRKLKQVYHLFQFIEPLLASVQADKGAVTLVDHGAGKSYLG
FILYDLFFKQQPGHGTPAFASHVYGIETREELVTRSTELAARLGFGGMSFLNLSVADSITSPKLPETVDVVTALHACDTA
TDDAIRFALAKRAQHIVLVPCCQAEVAGVLRRNKGKSLANALTEVWRHPLHTREFGSQITNVLRCLQLEAHGYQVSVTEL
VGWEHSMKNELIIAQYKNLPRRKPGERLNEILGMFGLAELNERFFVPAPAAAEGEAVEPAAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33789; Mature: 33658

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRRFTMSNKTYEIRPEQSVELLKELHILTRDGKLNQDSRRKLKQVYHLFQFIEPLLAS
CCCCCEECCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VQADKGAVTLVDHGAGKSYLGFILYDLFFKQQPGHGTPAFASHVYGIETREELVTRSTEL
HCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHH
AARLGFGGMSFLNLSVADSITSPKLPETVDVVTALHACDTATDDAIRFALAKRAQHIVLV
HHHHCCCCHHHEEEHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEE
PCCQAEVAGVLRRNKGKSLANALTEVWRHPLHTREFGSQITNVLRCLQLEAHGYQVSVTE
ECCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHH
LVGWEHSMKNELIIAQYKNLPRRKPGERLNEILGMFGLAELNERFFVPAPAAAEGEAVEP
HHCCHHHHCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCC
AAD
CCC
>Mature Secondary Structure 
ARRRFTMSNKTYEIRPEQSVELLKELHILTRDGKLNQDSRRKLKQVYHLFQFIEPLLAS
CCCCEECCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VQADKGAVTLVDHGAGKSYLGFILYDLFFKQQPGHGTPAFASHVYGIETREELVTRSTEL
HCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHH
AARLGFGGMSFLNLSVADSITSPKLPETVDVVTALHACDTATDDAIRFALAKRAQHIVLV
HHHHCCCCHHHEEEHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEE
PCCQAEVAGVLRRNKGKSLANALTEVWRHPLHTREFGSQITNVLRCLQLEAHGYQVSVTE
ECCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHH
LVGWEHSMKNELIIAQYKNLPRRKPGERLNEILGMFGLAELNERFFVPAPAAAEGEAVEP
HHCCHHHHCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCC
AAD
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA