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The map label for this gene is ybfB [H]

Identifier: 115350459

GI number: 115350459

Start: 454840

End: 456123

Strand: Direct

Name: ybfB [H]

Synonym: Bamb_0405

Alternate gene names: 115350459

Gene position: 454840-456123 (Clockwise)

Preceding gene: 115350456

Following gene: 115350460

Centisome position: 12.79

GC content: 69.55

Gene sequence:

>1284_bases
ATGAATTGGGCGGTGACACGAATCGGCGGGCGCTTCCACTACGGATGGCTCGCGGCGGCGGTGGTTTTCCTGATCCTGCT
GGCGGCGGCCGGCACGCGCGCGACGCCGAGCGTGCTGATGGTGCCGCTCGAGCGCGAACTCGGCTGGAGCCGCGCGGCGA
TTTCGCTGGCGATTTCGGTGAACATCGCGCTGTACGGCCTGACGGGCCCGTTCGCGGCCGCGGCGATGCAGCGTTTCGGG
CTTCGGCCGACGATCCTGACTGCGCTGGTGACGATGGGCGCGGGCGTCGCGCTGTCGTCGATGATGACGCAGAGCTGGCA
GATGGTCGTGATCTGGGGGCTGATGGTCGGCTGCTCGACGGGCGTCGTCGCGTTGACGCTGTCCGCGACCTTCGTCACGC
GCTGGTTCCATGCGAGGCGCGGGCTCGTGATGGGCATCCTGACCGCGAGCACGGCAACCGGCCAGCTCGTGTTCCTGCCG
ATGCTCGCGGCGATCGCGCAGCGCCACGGCTGGCGGCCGGTCGTACTCGTCGTTGCGGTCGCGGCCGCGATCGTGATTCC
GCTGGTCGCGTTCCTGCTGCCCGAGCGGCCGGCGGACGTGCAGTTGCGCCCGTACGGCGAGCCGGCCGATGCGCCGGCCG
CGCCCGACGCGACGAAGGAGAACCCGCTCGCGGTCGCGTTCCGCACGCTGCTGATGGCGAGCCGCTCGCGCGACTTCTGG
CTGCTGTTCTTCAGCTTCTTCATCTGCGGCGCGAGCACCAACGGCTATGTCGGCACGCACCTGATCGCGATGTGCAGCGA
CTACGGGATGACCGAAGTGCAGGGCGCGTCGCTGCTCGCCGCGATGGGCGTGTTCGACTTGTTCGGCACGACGCTGTCGG
GCTGGCTGTCCGACCGCTACGACAACCGCGTGCTGCTGTTCTGGTATTACGGGCTGCGCGGGCTGTCGCTGATCTACCTG
CCGCATGCGTTCGGCATCGATTTCTTCGGGCTGCCGCTGTTCGCGATGTTCTACGGGCTCGACTGGATCGCGACCGTGCC
GCCGACCGTGCGGCTCGCCACCGATGTGTTCGGCAAGGCCGCGGCGCCGGTCGTGTTCGGCTGGATCGTCGCCGGCCACC
AGCTCGGCGCGGCATTCGCGGCGCTCGGCGCAGGGTTGCTGCGTGCGAGCCTCGGCACCTATACGATCGCGTCGATGATC
TCGGGCGGGCTCTGCATCGTCGGCGCGCTGATCGTGCTGCGAATCAATCGCGGCCCGTCCCGCGCCGCCGCGCAGGCCGC
CTGA

Upstream 100 bases:

>100_bases
TGTCGGCCCAGGTCAGCCGACGCAGCGTGCGGCGGAGGTGGCCTGGTGGTGAGGCGGGGCGGGCGCGCGGGCGCCGGGCC
GGCAACTGGAGAGCGACAAC

Downstream 100 bases:

>100_bases
GCGGCGCTTCGGCCGGCCCGTGCGCGGCTGCGCGGCCGGGGCGGCCGCGTCGAGGAAGCCGAGCCGTCGTTCCGAGGCGG
GACGGCAGACGGGAGTTCCT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MNWAVTRIGGRFHYGWLAAAVVFLILLAAAGTRATPSVLMVPLERELGWSRAAISLAISVNIALYGLTGPFAAAAMQRFG
LRPTILTALVTMGAGVALSSMMTQSWQMVVIWGLMVGCSTGVVALTLSATFVTRWFHARRGLVMGILTASTATGQLVFLP
MLAAIAQRHGWRPVVLVVAVAAAIVIPLVAFLLPERPADVQLRPYGEPADAPAAPDATKENPLAVAFRTLLMASRSRDFW
LLFFSFFICGASTNGYVGTHLIAMCSDYGMTEVQGASLLAAMGVFDLFGTTLSGWLSDRYDNRVLLFWYYGLRGLSLIYL
PHAFGIDFFGLPLFAMFYGLDWIATVPPTVRLATDVFGKAAAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTIASMI
SGGLCIVGALIVLRINRGPSRAAAQAA

Sequences:

>Translated_427_residues
MNWAVTRIGGRFHYGWLAAAVVFLILLAAAGTRATPSVLMVPLERELGWSRAAISLAISVNIALYGLTGPFAAAAMQRFG
LRPTILTALVTMGAGVALSSMMTQSWQMVVIWGLMVGCSTGVVALTLSATFVTRWFHARRGLVMGILTASTATGQLVFLP
MLAAIAQRHGWRPVVLVVAVAAAIVIPLVAFLLPERPADVQLRPYGEPADAPAAPDATKENPLAVAFRTLLMASRSRDFW
LLFFSFFICGASTNGYVGTHLIAMCSDYGMTEVQGASLLAAMGVFDLFGTTLSGWLSDRYDNRVLLFWYYGLRGLSLIYL
PHAFGIDFFGLPLFAMFYGLDWIATVPPTVRLATDVFGKAAAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTIASMI
SGGLCIVGALIVLRINRGPSRAAAQAA
>Mature_427_residues
MNWAVTRIGGRFHYGWLAAAVVFLILLAAAGTRATPSVLMVPLERELGWSRAAISLAISVNIALYGLTGPFAAAAMQRFG
LRPTILTALVTMGAGVALSSMMTQSWQMVVIWGLMVGCSTGVVALTLSATFVTRWFHARRGLVMGILTASTATGQLVFLP
MLAAIAQRHGWRPVVLVVAVAAAIVIPLVAFLLPERPADVQLRPYGEPADAPAAPDATKENPLAVAFRTLLMASRSRDFW
LLFFSFFICGASTNGYVGTHLIAMCSDYGMTEVQGASLLAAMGVFDLFGTTLSGWLSDRYDNRVLLFWYYGLRGLSLIYL
PHAFGIDFFGLPLFAMFYGLDWIATVPPTVRLATDVFGKAAAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTIASMI
SGGLCIVGALIVLRINRGPSRAAAQAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI291621700, Length=414, Percent_Identity=19.5652173913043, Blast_Score=66, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17550316, Length=231, Percent_Identity=27.7056277056277, Blast_Score=72, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45429; Mature: 45429

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50850 MFS ; PS00283 SOYBEAN_KUNITZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWAVTRIGGRFHYGWLAAAVVFLILLAAAGTRATPSVLMVPLERELGWSRAAISLAISV
CCEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHCCCCCEEEEEEEEE
NIALYGLTGPFAAAAMQRFGLRPTILTALVTMGAGVALSSMMTQSWQMVVIWGLMVGCST
EEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCC
GVVALTLSATFVTRWFHARRGLVMGILTASTATGQLVFLPMLAAIAQRHGWRPVVLVVAV
CCEEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
AAAIVIPLVAFLLPERPADVQLRPYGEPADAPAAPDATKENPLAVAFRTLLMASRSRDFW
HHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH
LLFFSFFICGASTNGYVGTHLIAMCSDYGMTEVQGASLLAAMGVFDLFGTTLSGWLSDRY
HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
DNRVLLFWYYGLRGLSLIYLPHAFGIDFFGLPLFAMFYGLDWIATVPPTVRLATDVFGKA
CCEEEEEEEECCCCCEEEEECHHHCCCHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHCCH
AAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTIASMISGGLCIVGALIVLRINRGPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCC
RAAAQAA
CHHHCCC
>Mature Secondary Structure
MNWAVTRIGGRFHYGWLAAAVVFLILLAAAGTRATPSVLMVPLERELGWSRAAISLAISV
CCEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHCCCCCEEEEEEEEE
NIALYGLTGPFAAAAMQRFGLRPTILTALVTMGAGVALSSMMTQSWQMVVIWGLMVGCST
EEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCC
GVVALTLSATFVTRWFHARRGLVMGILTASTATGQLVFLPMLAAIAQRHGWRPVVLVVAV
CCEEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
AAAIVIPLVAFLLPERPADVQLRPYGEPADAPAAPDATKENPLAVAFRTLLMASRSRDFW
HHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH
LLFFSFFICGASTNGYVGTHLIAMCSDYGMTEVQGASLLAAMGVFDLFGTTLSGWLSDRY
HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
DNRVLLFWYYGLRGLSLIYLPHAFGIDFFGLPLFAMFYGLDWIATVPPTVRLATDVFGKA
CCEEEEEEEECCCCCEEEEECHHHCCCHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHCCH
AAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTIASMISGGLCIVGALIVLRINRGPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCC
RAAAQAA
CHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]