| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is hisE
Identifier: 115350406
GI number: 115350406
Start: 393886
End: 394251
Strand: Direct
Name: hisE
Synonym: Bamb_0351
Alternate gene names: 115350406
Gene position: 393886-394251 (Clockwise)
Preceding gene: 115350405
Following gene: 115350407
Centisome position: 11.07
GC content: 66.67
Gene sequence:
>366_bases ATGACGCAATCGACCGAAGACACGCTGCTGCGCCTCGCGGCCGTGATCGATAGCCGCAAGGGCGGCGACCCCGATCAATC GTACGTATCGCGCCTGTTTCACAAGGGCGACGACGCGGTGCTGAAGAAGATCGGCGAAGAGGCGACCGAAGTCGTGCTGG CCGCGAAGGACGTGCGCCAGGGCGGCGCGCCGACGGCGCTGGTCGGCGAAGTGGCCGATCTGTGGTTCCACTGCCTCGTG ATGCTGTCGCATTTCGACCTGAGCCCGGCCGACGTGATCGGCGAGCTCGAGCGCCGCGAAGGGTTGTCGGGCATCGAGGA AAAGGCGCTGCGCAAGCGCCGCGAGCGCGAAGAAAACGGCGGGTGA
Upstream 100 bases:
>100_bases GCCGGCATTCGTGCTTCTTCCAGAAATTCGAAGGCACGGTGGACGGCGGCGACTGGGTCGCGGTCGATCCGGTGCTGAAA GACCCCGAACACATCTACAA
Downstream 100 bases:
>100_bases CGGCTCACGGCCTGCCGCGCCGGCAACAGTGCGGTAAGCTGTAAGAATTGTCATCTGACGGGGGTAGCATCATGACCGAT ACGCCGAGCGAGTTTCCGAC
Product: phosphoribosyl-ATP pyrophosphatase
Products: NA
Alternate protein names: PRA-PH [H]
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MTQSTEDTLLRLAAVIDSRKGGDPDQSYVSRLFHKGDDAVLKKIGEEATEVVLAAKDVRQGGAPTALVGEVADLWFHCLV MLSHFDLSPADVIGELERREGLSGIEEKALRKRREREENGG
Sequences:
>Translated_121_residues MTQSTEDTLLRLAAVIDSRKGGDPDQSYVSRLFHKGDDAVLKKIGEEATEVVLAAKDVRQGGAPTALVGEVADLWFHCLV MLSHFDLSPADVIGELERREGLSGIEEKALRKRREREENGG >Mature_120_residues TQSTEDTLLRLAAVIDSRKGGDPDQSYVSRLFHKGDDAVLKKIGEEATEVVLAAKDVRQGGAPTALVGEVADLWFHCLVM LSHFDLSPADVIGELERREGLSGIEEKALRKRREREENGG
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0140
COG function: function code E; Phosphoribosyl-ATP pyrophosphohydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-PH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008179 - InterPro: IPR021130 [H]
Pfam domain/function: PF01503 PRA-PH [H]
EC number: =3.6.1.31 [H]
Molecular weight: Translated: 13274; Mature: 13143
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSTEDTLLRLAAVIDSRKGGDPDQSYVSRLFHKGDDAVLKKIGEEATEVVLAAKDVRQ CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC GGAPTALVGEVADLWFHCLVMLSHFDLSPADVIGELERREGLSGIEEKALRKRREREENG CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC G C >Mature Secondary Structure TQSTEDTLLRLAAVIDSRKGGDPDQSYVSRLFHKGDDAVLKKIGEEATEVVLAAKDVRQ CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC GGAPTALVGEVADLWFHCLVMLSHFDLSPADVIGELERREGLSGIEEKALRKRREREENG CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA