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The map label for this gene is ychE [H]

Identifier: 115350401

GI number: 115350401

Start: 390416

End: 391036

Strand: Direct

Name: ychE [H]

Synonym: Bamb_0346

Alternate gene names: 115350401

Gene position: 390416-391036 (Clockwise)

Preceding gene: 115350400

Following gene: 115350402

Centisome position: 10.98

GC content: 64.09

Gene sequence:

>621_bases
ATGGATCTGCTCAAATCGTTCATTTCGCTGCTGGCGCTGATCAACCCGGTCGGCGCCGTGCCGTTCTTCCTGAGCCTGAC
CGCGCAGCAAACGGACGGCGAGCGGCGCCGCACGATCCGGATCGCGTCGGTGTCGGTGTTCTGCGTGATGACGGTGACGA
CGCTGCTCGGGCAGCAGATCATCGACTTCTTCGGCATTTCGGTCGGCTCGCTCGAAGTGGGCGGCGGGATCATCATGCTG
CTGATGGCGATCAACATGCTGAACGCGCAGATCGGCAACACGCGATCGACGCCGGAGGAGCGCTACGAGGCCGAGTCGAA
GGACAACATCGCGGTCGTGCCGCTGGCGATTCCGCTGCTCACGGGCCCCGGCTCGATCAGCACGGTGATCATCTATGCGG
CGAACTCGCATCACTGGTATGAGCGGGCCGGGCTGGTCGCGATCGGCGCGGCCCTGGCTTTTCTGTGTTTCGTCGCGATG
CGGCTCGCCGAGCCGATCGCGAACTGGATCGGCCGCACCGGCATCAACATCGCCACGCGGCTGATGGGTCTGATGCTGTC
GGCGCTGGCGGTGGAATTCATCGTCAACGGACTGAGGGCGCTACTGCCTGCACTGAGATGA

Upstream 100 bases:

>100_bases
CGGCGGGGCAGATTCCGTCGACGAAGGGCAGCCTCTAACCTTCCGGACGGGCGCACGCCCAGGACAACCTCACGGCTTCG
GCGCGGCGCGCCGGCTTGCG

Downstream 100 bases:

>100_bases
AAACTTCGATTGCGATTGTGGATTATGGAATGGGCAACCTGCGCTCGGTCGCGCAGGCGCTCAAGAAGGCCGAACCGGCC
GCCGACGTGGCGATCGTCGA

Product: multiple antibiotic resistance (MarC)--like proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MDLLKSFISLLALINPVGAVPFFLSLTAQQTDGERRRTIRIASVSVFCVMTVTTLLGQQIIDFFGISVGSLEVGGGIIML
LMAINMLNAQIGNTRSTPEERYEAESKDNIAVVPLAIPLLTGPGSISTVIIYAANSHHWYERAGLVAIGAALAFLCFVAM
RLAEPIANWIGRTGINIATRLMGLMLSALAVEFIVNGLRALLPALR

Sequences:

>Translated_206_residues
MDLLKSFISLLALINPVGAVPFFLSLTAQQTDGERRRTIRIASVSVFCVMTVTTLLGQQIIDFFGISVGSLEVGGGIIML
LMAINMLNAQIGNTRSTPEERYEAESKDNIAVVPLAIPLLTGPGSISTVIIYAANSHHWYERAGLVAIGAALAFLCFVAM
RLAEPIANWIGRTGINIATRLMGLMLSALAVEFIVNGLRALLPALR
>Mature_206_residues
MDLLKSFISLLALINPVGAVPFFLSLTAQQTDGERRRTIRIASVSVFCVMTVTTLLGQQIIDFFGISVGSLEVGGGIIML
LMAINMLNAQIGNTRSTPEERYEAESKDNIAVVPLAIPLLTGPGSISTVIIYAANSHHWYERAGLVAIGAALAFLCFVAM
RLAEPIANWIGRTGINIATRLMGLMLSALAVEFIVNGLRALLPALR

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=202, Percent_Identity=38.1188118811881, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI1787809, Length=195, Percent_Identity=34.8717948717949, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI1789842, Length=203, Percent_Identity=29.5566502463054, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22099; Mature: 22099

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLKSFISLLALINPVGAVPFFLSLTAQQTDGERRRTIRIASVSVFCVMTVTTLLGQQI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHH
IDFFGISVGSLEVGGGIIMLLMAINMLNAQIGNTRSTPEERYEAESKDNIAVVPLAIPLL
HHHHCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEEEEEEEE
TGPGSISTVIIYAANSHHWYERAGLVAIGAALAFLCFVAMRLAEPIANWIGRTGINIATR
CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LMGLMLSALAVEFIVNGLRALLPALR
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLLKSFISLLALINPVGAVPFFLSLTAQQTDGERRRTIRIASVSVFCVMTVTTLLGQQI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHH
IDFFGISVGSLEVGGGIIMLLMAINMLNAQIGNTRSTPEERYEAESKDNIAVVPLAIPLL
HHHHCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEEEEEEEE
TGPGSISTVIIYAANSHHWYERAGLVAIGAALAFLCFVAMRLAEPIANWIGRTGINIATR
CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LMGLMLSALAVEFIVNGLRALLPALR
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2015910; 9097039; 9278503 [H]