| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is hisH
Identifier: 115350402
GI number: 115350402
Start: 391033
End: 391674
Strand: Direct
Name: hisH
Synonym: Bamb_0347
Alternate gene names: 115350402
Gene position: 391033-391674 (Clockwise)
Preceding gene: 115350401
Following gene: 115350403
Centisome position: 10.99
GC content: 66.51
Gene sequence:
>642_bases ATGAAAACTTCGATTGCGATTGTGGATTATGGAATGGGCAACCTGCGCTCGGTCGCGCAGGCGCTCAAGAAGGCCGAACC GGCCGCCGACGTGGCGATCGTCGACACGCCGGCCGCGATTCGCGCGGCCGACCGCGTCGTGCTGCCCGGCCAGGGCGCGA TGCCGGACTGCATGCGCTGCCTCGGCGAATCGGGGCTGCAGGACGCGGTGATCGAGGCCTCGCGCACGAAGCCGCTGCTC GGCGTGTGCGTCGGCGAGCAGATGCTGTTCGACTGGAGCGCGGAAGGCGACACGAAGGGCCTGGGCCTGTTGCCCGGCAA GGTCGTGCGCTTCGAGCTCGACGGCCGGCTGCAGGACGACGGCTCGCGCTTCAAGGTGCCGCAGATGGGCTGGAACCGCG TGCGCCAGTCGCAGCCGCACCCGCTGTGGGACGGCGTGCCCGACGACGCATACTTTTACTTCGTACACAGCTATTACGTG AGGCCGGACAACCCGGCACATACGGTCGGCGAAACGGCATACGGCGCGCCGTTTACGTCCGCGGTCGCGCGGGACAATCT CTTCGCGACCCAATTCCACCCCGAGAAAAGCGCGGAAGTCGGGTTGCGTCTGTATCGCAACTTCGTACACTGGAAGCCGT GA
Upstream 100 bases:
>100_bases CCGGCATCAACATCGCCACGCGGCTGATGGGTCTGATGCTGTCGGCGCTGGCGGTGGAATTCATCGTCAACGGACTGAGG GCGCTACTGCCTGCACTGAG
Downstream 100 bases:
>100_bases GCGTCGCGTGCGTGCTACAGTCGGCGGGCCGGAACGGCCTGTCGCACGATGCGCGCACACGAAAGCGCCGAAAGAGTTGT ACTAAACTAGCGAGGCGGCG
Product: imidazole glycerol phosphate synthase subunit HisH
Products: D-erythro-imidazole-glycerol-phosphate; AICAR; L-glutamate [C]
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKTSIAIVDYGMGNLRSVAQALKKAEPAADVAIVDTPAAIRAADRVVLPGQGAMPDCMRCLGESGLQDAVIEASRTKPLL GVCVGEQMLFDWSAEGDTKGLGLLPGKVVRFELDGRLQDDGSRFKVPQMGWNRVRQSQPHPLWDGVPDDAYFYFVHSYYV RPDNPAHTVGETAYGAPFTSAVARDNLFATQFHPEKSAEVGLRLYRNFVHWKP
Sequences:
>Translated_213_residues MKTSIAIVDYGMGNLRSVAQALKKAEPAADVAIVDTPAAIRAADRVVLPGQGAMPDCMRCLGESGLQDAVIEASRTKPLL GVCVGEQMLFDWSAEGDTKGLGLLPGKVVRFELDGRLQDDGSRFKVPQMGWNRVRQSQPHPLWDGVPDDAYFYFVHSYYV RPDNPAHTVGETAYGAPFTSAVARDNLFATQFHPEKSAEVGLRLYRNFVHWKP >Mature_213_residues MKTSIAIVDYGMGNLRSVAQALKKAEPAADVAIVDTPAAIRAADRVVLPGQGAMPDCMRCLGESGLQDAVIEASRTKPLL GVCVGEQMLFDWSAEGDTKGLGLLPGKVVRFELDGRLQDDGSRFKVPQMGWNRVRQSQPHPLWDGVPDDAYFYFVHSYYV RPDNPAHTVGETAYGAPFTSAVARDNLFATQFHPEKSAEVGLRLYRNFVHWKP
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=208, Percent_Identity=37.0192307692308, Blast_Score=122, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6319725, Length=218, Percent_Identity=32.1100917431193, Blast_Score=101, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.- [C]
Molecular weight: Translated: 23407; Mature: 23407
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSIAIVDYGMGNLRSVAQALKKAEPAADVAIVDTPAAIRAADRVVLPGQGAMPDCMRC CCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHCCEEEECCCCCCHHHHHH LGESGLQDAVIEASRTKPLLGVCVGEQMLFDWSAEGDTKGLGLLPGKVVRFELDGRLQDD HCCCCCHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEECCEECCC GSRFKVPQMGWNRVRQSQPHPLWDGVPDDAYFYFVHSYYVRPDNPAHTVGETAYGAPFTS CCEEECCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHCCCCCCCCCHHH AVARDNLFATQFHPEKSAEVGLRLYRNFVHWKP HHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKTSIAIVDYGMGNLRSVAQALKKAEPAADVAIVDTPAAIRAADRVVLPGQGAMPDCMRC CCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHCCEEEECCCCCCHHHHHH LGESGLQDAVIEASRTKPLLGVCVGEQMLFDWSAEGDTKGLGLLPGKVVRFELDGRLQDD HCCCCCHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEECCEECCC GSRFKVPQMGWNRVRQSQPHPLWDGVPDDAYFYFVHSYYVRPDNPAHTVGETAYGAPFTS CCEEECCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHCCCCCCCCCHHH AVARDNLFATQFHPEKSAEVGLRLYRNFVHWKP HHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phosphoribulosylformimino-AICAR-P; L-glutamine [C]
Specific reaction: phosphoribulosylformimino-AICAR-P + L-glutamine = D-erythro-imidazole-glycerol-phosphate + AICAR + L-glutamate [C]
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12754231 [H]